Gene
RNA
| Item | Value |
|---|---|
| gene id | G1145292 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 13660558 ~ 13661218 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1306335 | True | 608 | lncRNA | 0.34 | 2 | 13660558 | 13661218 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136256 | LOC100136256 | coding | downstream | 38980 | 13619768 ~ 13652557 (-) |
| LOC110485698 | LOC106564568 | coding | downstream | 46475 | 13600728 ~ 13614083 (-) |
| LOC110485683 | LOC106589359 | coding | downstream | 109894 | 13544642 ~ 13550664 (-) |
| LOC110485687 | LOC106564530 | coding | downstream | 118490 | 13525979 ~ 13542068 (-) |
| LOC110485686 | LOC106589400 | coding | downstream | 135858 | 13519344 ~ 13524700 (-) |
| LOC110485695 | LOC106564561 | coding | upstream | 4584 | 13665802 ~ 13672084 (-) |
| LOC110485694 | LOC106564562 | coding | upstream | 13432 | 13674650 ~ 13681639 (-) |
| LOC110485693 | LOC106589449 | coding | upstream | 28545 | 13689763 ~ 13698310 (-) |
| c13h22orf23 | cssa12h22orf23 | coding | upstream | 61603 | 13722821 ~ 13726634 (-) |
| LOC110485690 | sox10 | coding | upstream | 67294 | 13728512 ~ 13733700 (-) |
| G1145234 | NA | non-coding | downstream | 104268 | 13556069 ~ 13556290 (-) |
| G1145209 | NA | non-coding | downstream | 142826 | 13517440 ~ 13517732 (-) |
| G1145203 | NA | non-coding | downstream | 159898 | 13499483 ~ 13500660 (-) |
| LOC110485677 | LOC106564572 | non-coding | downstream | 188657 | 13471224 ~ 13494372 (-) |
| G1145224 | NA | non-coding | upstream | 27910 | 13689128 ~ 13700548 (-) |
| G1145301 | NA | non-coding | upstream | 46009 | 13707227 ~ 13707457 (-) |
| G1145303 | NA | non-coding | upstream | 49405 | 13710623 ~ 13710888 (-) |
| G1145305 | NA | non-coding | upstream | 49987 | 13711205 ~ 13711453 (-) |
| G1145306 | NA | non-coding | upstream | 50524 | 13711742 ~ 13711976 (-) |
| G1145110 | LOC106589620 | other | downstream | 299750 | 13357074 ~ 13360808 (-) |
| G1145046 | LOC106589870 | other | downstream | 366415 | 13292935 ~ 13294143 (-) |
| LOC110485655 | rab3d | other | downstream | 489401 | 13163816 ~ 13178960 (-) |
| G1145035 | NA | other | downstream | 533960 | 13124870 ~ 13126598 (-) |
| G1144338 | NA | other | downstream | 1042400 | 12617959 ~ 12618158 (-) |
| LOC110485696 | LOC106564559 | other | upstream | 1962 | 13657453 ~ 13665295 (-) |
| LOC110485704 | NA | other | upstream | 142348 | 13798679 ~ 13812239 (-) |
| G1145789 | LOC106588930 | other | upstream | 425734 | 14086952 ~ 14087567 (-) |
| G1145790 | NA | other | upstream | 428440 | 14089658 ~ 14090787 (-) |
| G1145830 | LOC103354157 | other | upstream | 516029 | 14177247 ~ 14180330 (-) |
