G1145789 (LOC106588930)


Basic Information

Item Value
gene id G1145789
gene name LOC106588930
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 14086952 ~ 14087567 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1306939
ACTCCCAGTCACCCCCTGCTATGCCTCCACCCCCCACTTCAGACATGTTCTTCTCCCAACACGTGTGGGCCTGTTGCCCTGACGACCCCAAGCCCATTCCTCCGACTACGCCACTTTTACCCTCTGACTTCTTGGGTTTGTTACCTTTCAGGAAATCCTCCACAGGCACTAGGCTCTTACAAatgccactaccactactaccgccAGCGACTCCTCCTCCCCTACCGCCCATCGGACAAGGCCCGTCGGACACATCCACATGCTCCCACTTGGCAGAGCCCTGCTTGGAATGGACCTGCTCCGCATAGAACTCCCTCAGATTTTCTTTGTCGCGGAATAAGTAAGGTGAAGAgttaccccctcctcctccacctcctccacctcctcctctcttccgctCAGAGGGGACCAGGGGTGGGGAGGCCGAGCGGTGTCCCAGGGGCCCGCGGGAGAAGTGGTGGTGGACGGTGTGATGGTGGTGGGCTCGCCTCCGGTAATCAATCTCGTCCTGCTCCCGTCTGGATTTGGCTGAGGCGGGCCTCTTTTTCAAGCTGTCCCTGTACTGTTTACGCCTCTTGGCGTTGCCCTCCAGATTGCCGTAGGTGATGGTGTGTGA

Function

NR:

description
PREDICTED: glutamate receptor ionotropic, NMDA 2B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1306939 True 616 TUCP 0.59 1 14086952 14087567

Neighbor

gene id symbol gene type direction distance location
LOC110485709 NA coding downstream 190221 13895588 ~ 13896731 (-)
LOC110485704 NA coding downstream 274883 13798679 ~ 13812239 (-)
smdt1b NA coding downstream 303822 13781575 ~ 13783130 (-)
LOC110485689 LOC106564549 coding downstream 324704 13753096 ~ 13762248 (-)
LOC110485690 sox10 coding downstream 353252 13728512 ~ 13733700 (-)
LOC110485713 LOC106588978 coding upstream 24959 14112526 ~ 14116588 (-)
LOC118936523 NA coding upstream 155036 14242603 ~ 14244662 (-)
LOC118938216 NA coding upstream 167913 14255480 ~ 14275408 (-)
LOC118938215 NA coding upstream 169966 14257533 ~ 14258326 (-)
LOC110485718 NA coding upstream 178113 14265680 ~ 14269377 (-)
G1145742 NA non-coding downstream 61768 14000345 ~ 14025184 (-)
G1145733 NA non-coding downstream 104990 13981438 ~ 13981962 (-)
G1145732 NA non-coding downstream 107157 13978365 ~ 13979795 (-)
G1145720 NA non-coding downstream 123158 13962697 ~ 13963794 (-)
G1145637 NA non-coding downstream 262999 13823703 ~ 13823953 (-)
G1145787 LOC106589277 non-coding upstream 754 14088321 ~ 14088584 (-)
G1145788 NA non-coding upstream 1122 14088689 ~ 14089378 (-)
G1145792 NA non-coding upstream 3380 14090947 ~ 14095394 (-)
G1145797 NA non-coding upstream 17497 14105064 ~ 14105861 (-)
G1145801 NA non-coding upstream 30556 14118123 ~ 14118444 (-)
LOC110485696 LOC106564559 other downstream 423332 13657453 ~ 13665295 (-)
G1145110 LOC106589620 other downstream 726144 13357074 ~ 13360808 (-)
G1145046 LOC106589870 other downstream 792809 13292935 ~ 13294143 (-)
LOC110485655 rab3d other downstream 915795 13163816 ~ 13178960 (-)
G1145790 NA other upstream 2091 14089658 ~ 14090787 (-)
G1145830 LOC103354157 other upstream 89680 14177247 ~ 14180330 (-)
G1146251 NA other upstream 623015 14710582 ~ 14711954 (-)
G1146446 NA other upstream 709099 14796666 ~ 14797272 (-)
G1146485 NA other upstream 835043 14922610 ~ 14925617 (-)

Expression


Co-expression Network