G1145875


Basic Information

Item Value
gene id G1145875
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 14303758 ~ 14305639 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1307066
TGTTTTTAAAAATTTTATATCATAAATAACAAAAAGAAAAAACATTAATAGCTCAATAAATCATGTTAAAGATGAATTAAATATAGAATAGAATGATCAGTGCAAAAATCTCCTGGTTAGCTGGGTACCAGGGTGAGGTGCACTGTAATAAGGTTGGTTTAGTGAGCGCCTCAGTGCAGACTTTTGAGTGAACAAATACAGTATGAGAAAACGATGGGTCAACAGAGGAAATTCTGTGGTGATACAGTTTTGAAATAAAGTACAATATGAAAACAGAACCGTTTTGAATTCATCCTTACAATACATCACCTTTTTTTTATTGCATCTCACATTTATTTATGTCACTGAAATATATGCATTCGTGCTCAAGCCTACTGTGCTGTATGTTAAATGTGTCTCTGTGAAATCCTTGAACAGTGATCCTTTAAAAAGCGGAGAAGAATATGATTCATGTCTTCCGAAGTTCTCAAGTCTGCTACCATCCTTCTCTTCTGCGGCTGTCAGAGTAAATCCAGAGCAAACTGCCCTTTCGTTTGAGTAAATTCCCTTGCTGTTTGCACAGAAAGATTCTACTACTGATGTATATCTACAGCTACTGGATAACATGACTACACCAGATAAAAGTATAGTAGGACTCAGATCAACACAATCCATCAGGTCGCAAAGGGTGCAGACATTCACCCCCACACAATAATAAAAACCTGTCAACAAACAtcagttacacacacacacacagacagacagagggcgagagagggtgagaaagagagggcaagagagagagggggcgggagagggcgagagagagcgagagagagagggcgagagagaaagagcgtcTAACAAACCAAAATTGTTTCTCTGAAAACTCCCAGAACATTTGTTAGGTTGCGGCAAATGTTAtcataacacaaaaactgtccagtcgtgctgatgattatacaatgtttgtataaacatttgcctgatgttgcaagaacgttCCCAGAACGTTGCGCATACATTTTGTTGCAGCAGTATGTTCAAAAAACATTGCTGGTacattgtgttattacattaGCAGGAAACATAACGAGAATGTTGTTTGGGGAatggtggttgttacagatgttgtgcgTTTTGTGAATGTTAGGAGAACGTCCTAATTTTGTATAAAAACCCTTTCTTATGTTCTGGGTATGTTCCCGGTTTGCTGGGCAGTCTGTCCTGTCTCTTCACTGGGGTCAGCCAGTCAAGTCAGGTGAACCAAGAGAGTCCATACAGCACAGTCCATACAGCACAGTCCATACAGCACAGTCCATACACTACTACACAAAAGAGTGTCACTGATCCTTATCAAATCTTTTAGATTTTGAAGAAGCCTGctcgctcttctctcctctggCTTTCATTTCCCTCGGCTTTGACTGCGATGGAAATATCCCTTGCTGCTGTGGCGGCTCCACGGACAGCATAACTCACAAGAACAGCCAAAATAATGCCTATAGGAATCCCAATACATGCGCCAAGTGTTCCATGTTCTGCACCTGCAACTGCTCCCATGAGTGCCCCCACTACAGCAGTCATAATCACTATTAGTGGTTTGACGTAGTGGCCCACCACAGACAAGGCCTCTTCCCTGTATCCTTGCTTGACGGCCTGTAGGTCCACCTTCTGATGGTCAGCCATTACCGACCCGTCCTGCTTCTCTGT

Function

NR:

description
GTPase IMAP family member 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1307066 True 1692 lncRNA 0.42 3 14303758 14305639

Neighbor

gene id symbol gene type direction distance location
LOC118938216 NA coding downstream 28350 14255480 ~ 14275408 (-)
LOC110485718 NA coding downstream 34381 14265680 ~ 14269377 (-)
LOC118938215 NA coding downstream 45432 14257533 ~ 14258326 (-)
LOC118936523 NA coding downstream 59096 14242603 ~ 14244662 (-)
LOC110485713 LOC106588978 coding downstream 187170 14112526 ~ 14116588 (-)
LOC110485726 LOC106564611 coding upstream 34014 14339653 ~ 14361981 (-)
LOC110485728 LOC100380663 coding upstream 64045 14369684 ~ 14409130 (-)
LOC110485730 cp063 coding upstream 109402 14415041 ~ 14418756 (-)
LOC110485729 LOC106588920 coding upstream 114559 14420198 ~ 14451351 (-)
LOC110485733 xylt1 coding upstream 240888 14546527 ~ 14674363 (-)
G1145890 LOC106588948 non-coding downstream 4926 14298397 ~ 14298832 (-)
G1145889 NA non-coding downstream 6142 14296311 ~ 14297616 (-)
G1145881 NA non-coding downstream 26577 14276958 ~ 14277181 (-)
G1145843 NA non-coding downstream 93133 14201873 ~ 14210625 (-)
G1145830 LOC103354157 non-coding downstream 123428 14177247 ~ 14180330 (-)
G1145894 LOC106564577 non-coding upstream 6998 14312637 ~ 14326898 (-)
G1145860 NA non-coding upstream 29772 14335411 ~ 14339360 (-)
G1146001 NA non-coding upstream 154180 14459819 ~ 14460042 (-)
G1146005 NA non-coding upstream 161546 14467185 ~ 14467426 (-)
G1145790 NA other downstream 212971 14089658 ~ 14090787 (-)
G1145789 LOC106588930 other downstream 216191 14086952 ~ 14087567 (-)
LOC110485704 NA other downstream 491519 13798679 ~ 13812239 (-)
LOC110485696 LOC106564559 other downstream 640138 13657453 ~ 13665295 (-)
G1146251 NA other upstream 404943 14710582 ~ 14711954 (-)
G1146446 NA other upstream 491027 14796666 ~ 14797272 (-)
G1146485 NA other upstream 616971 14922610 ~ 14925617 (-)
LOC110485744 LOC106588598 other upstream 1076521 15376146 ~ 15383913 (-)
LOC110485748 pdcd11 other upstream 1129462 15432063 ~ 15454831 (-)

Expression

G1145875 Expression in all Baseline Samples

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G1145875 Expression in each Bioproject

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G1145875 Expression in each Sample
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Co-expression Network