Gene
RNA
| Item | Value |
|---|---|
| gene id | G1146251 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 14710582 ~ 14711954 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: proline-rich extensin-like protein EPR1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1307487 | True | 1373 | TUCP | 0.46 | 1 | 14710582 | 14711954 |
14,708,800
14,709,200
14,709,600
14,710,000
14,710,400
14,710,800
14,711,200
14,711,600
14,712,000
14,712,400
14,712,800
14,713,200
14,713,600
14,714,000
14,714,400
14,714,800
14,715,200
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485733 | xylt1 | coding | downstream | 36219 | 14546527 ~ 14674363 (-) |
| LOC110485729 | LOC106588920 | coding | downstream | 259231 | 14420198 ~ 14451351 (-) |
| LOC110485730 | cp063 | coding | downstream | 291826 | 14415041 ~ 14418756 (-) |
| LOC110485728 | LOC100380663 | coding | downstream | 301452 | 14369684 ~ 14409130 (-) |
| LOC110485726 | LOC106564611 | coding | downstream | 348601 | 14339653 ~ 14361981 (-) |
| LOC110487291 | LOC106564596 | coding | upstream | 92714 | 14804668 ~ 14843432 (-) |
| LOC110487289 | LOC106588894 | coding | upstream | 163889 | 14875843 ~ 14891457 (-) |
| LOC110485736 | sec23b | coding | upstream | 183876 | 14895830 ~ 14911145 (-) |
| LOC118938532 | NA | coding | upstream | 423648 | 15135602 ~ 15141540 (-) |
| LOC118938534 | LOC106564623 | coding | upstream | 642712 | 15354666 ~ 15357765 (-) |
| G1146248 | NA | non-coding | downstream | 3900 | 14705561 ~ 14706682 (-) |
| G1146246 | NA | non-coding | downstream | 5447 | 14704630 ~ 14705135 (-) |
| G1146229 | NA | non-coding | downstream | 28763 | 14681614 ~ 14681819 (-) |
| G1146228 | NA | non-coding | downstream | 31920 | 14678175 ~ 14678662 (-) |
| G1146178 | NA | non-coding | downstream | 119340 | 14590992 ~ 14591242 (-) |
| G1146255 | NA | non-coding | upstream | 7487 | 14719441 ~ 14720085 (-) |
| G1146259 | NA | non-coding | upstream | 13108 | 14725062 ~ 14725376 (-) |
| G1146465 | NA | non-coding | upstream | 150001 | 14861955 ~ 14863490 (-) |
| G1146466 | NA | non-coding | upstream | 151924 | 14863878 ~ 14866676 (-) |
| G1146484 | NA | non-coding | upstream | 204450 | 14916404 ~ 14917938 (-) |
| G1145830 | LOC103354157 | other | downstream | 530252 | 14177247 ~ 14180330 (-) |
| G1145790 | NA | other | downstream | 619795 | 14089658 ~ 14090787 (-) |
| G1145789 | LOC106588930 | other | downstream | 623015 | 14086952 ~ 14087567 (-) |
| LOC110485704 | NA | other | downstream | 898343 | 13798679 ~ 13812239 (-) |
| LOC110485696 | LOC106564559 | other | downstream | 1046962 | 13657453 ~ 13665295 (-) |
| G1146446 | NA | other | upstream | 84712 | 14796666 ~ 14797272 (-) |
| G1146485 | NA | other | upstream | 210656 | 14922610 ~ 14925617 (-) |
| LOC110485744 | LOC106588598 | other | upstream | 670206 | 15376146 ~ 15383913 (-) |
| LOC110485748 | pdcd11 | other | upstream | 723147 | 15432063 ~ 15454831 (-) |
| G1147096 | NA | other | upstream | 879360 | 15591314 ~ 15591714 (-) |
