Gene
RNA
| Item | Value |
|---|---|
| gene id | G1150368 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 18540240 ~ 18540440 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1311937 | True | 201 | lncRNA | 0.40 | 1 | 18540240 | 18540440 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485799 | LOC106586988 | coding | upstream | 289403 | 18236043 ~ 18250838 (+) |
| LOC110485797 | LOC106586973 | coding | upstream | 304706 | 18225172 ~ 18235534 (+) |
| LOC118938622 | NA | coding | upstream | 315949 | 18224173 ~ 18224291 (+) |
| LOC118938572 | NA | coding | upstream | 318084 | 18222015 ~ 18222156 (+) |
| LOC118938573 | NA | coding | upstream | 319417 | 18220680 ~ 18220823 (+) |
| LOC110485807 | LOC106564674 | coding | downstream | 78636 | 18619076 ~ 18623922 (+) |
| cfap52 | cfap52 | coding | downstream | 91612 | 18632052 ~ 18645428 (+) |
| LOC110485810 | LOC106587099 | coding | downstream | 107280 | 18647720 ~ 18774065 (+) |
| grb2a | LOC107728184 | coding | downstream | 251424 | 18791864 ~ 18823288 (+) |
| LOC110485812 | LOC106587115 | coding | downstream | 302516 | 18842956 ~ 18852140 (+) |
| G1150366 | NA | non-coding | upstream | 1446 | 18538490 ~ 18538794 (+) |
| G1150362 | NA | non-coding | upstream | 6407 | 18533624 ~ 18533833 (+) |
| G1150361 | NA | non-coding | upstream | 8040 | 18531983 ~ 18532200 (+) |
| G1150343 | NA | non-coding | upstream | 45103 | 18494897 ~ 18495137 (+) |
| G1150336 | NA | non-coding | upstream | 66428 | 18473594 ~ 18473812 (+) |
| G1150369 | NA | non-coding | downstream | 1914 | 18542354 ~ 18542553 (+) |
| G1150376 | NA | non-coding | downstream | 12749 | 18553189 ~ 18553455 (+) |
| G1150378 | NA | non-coding | downstream | 16515 | 18556955 ~ 18557293 (+) |
| G1150380 | NA | non-coding | downstream | 18041 | 18558481 ~ 18558792 (+) |
| ntn1a | LOC105012279 | non-coding | downstream | 27032 | 18471857 ~ 18569139 (+) |
| G1150206 | NA | other | upstream | 283886 | 18253248 ~ 18256354 (+) |
| G1148286 | NA | other | upstream | 1830129 | 16708824 ~ 16710111 (+) |
| G1147590 | LOC106586738 | other | upstream | 2232707 | 16300976 ~ 16307533 (+) |
| G1147529 | NA | other | upstream | 2339613 | 16199471 ~ 16200627 (+) |
| G1150536 | NA | other | downstream | 286946 | 18827386 ~ 18827882 (+) |
| LOC110485813 | LOC106587120 | other | downstream | 311971 | 18852294 ~ 18855764 (+) |
| G1151061 | LOC106587131 | other | downstream | 356628 | 18897068 ~ 18920852 (+) |
| G1152196 | NA | other | downstream | 1512811 | 20053251 ~ 20072923 (+) |
| LOC110485866 | LOC106587513 | other | downstream | 1637563 | 20177543 ~ 20183351 (+) |
