Gene
RNA
| Item | Value |
|---|---|
| gene id | G1150369 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 18542354 ~ 18542553 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1311938 | True | 200 | lncRNA | 0.39 | 1 | 18542354 | 18542553 |
18,541,600
18,542,000
18,542,400
18,542,800
18,543,200
18,543,600
18,544,000
18,544,400
18,544,800
18,545,200
18,545,600
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485799 | LOC106586988 | coding | upstream | 291517 | 18236043 ~ 18250838 (+) |
| LOC110485797 | LOC106586973 | coding | upstream | 306820 | 18225172 ~ 18235534 (+) |
| LOC118938622 | NA | coding | upstream | 318063 | 18224173 ~ 18224291 (+) |
| LOC118938572 | NA | coding | upstream | 320198 | 18222015 ~ 18222156 (+) |
| LOC118938573 | NA | coding | upstream | 321531 | 18220680 ~ 18220823 (+) |
| LOC110485807 | LOC106564674 | coding | downstream | 76523 | 18619076 ~ 18623922 (+) |
| cfap52 | cfap52 | coding | downstream | 89499 | 18632052 ~ 18645428 (+) |
| LOC110485810 | LOC106587099 | coding | downstream | 105167 | 18647720 ~ 18774065 (+) |
| grb2a | LOC107728184 | coding | downstream | 249311 | 18791864 ~ 18823288 (+) |
| LOC110485812 | LOC106587115 | coding | downstream | 300403 | 18842956 ~ 18852140 (+) |
| G1150368 | NA | non-coding | upstream | 1914 | 18540240 ~ 18540440 (+) |
| G1150366 | NA | non-coding | upstream | 3560 | 18538490 ~ 18538794 (+) |
| G1150362 | NA | non-coding | upstream | 8521 | 18533624 ~ 18533833 (+) |
| G1150361 | NA | non-coding | upstream | 10154 | 18531983 ~ 18532200 (+) |
| G1150343 | NA | non-coding | upstream | 47217 | 18494897 ~ 18495137 (+) |
| G1150376 | NA | non-coding | downstream | 10636 | 18553189 ~ 18553455 (+) |
| G1150378 | NA | non-coding | downstream | 14402 | 18556955 ~ 18557293 (+) |
| G1150380 | NA | non-coding | downstream | 15928 | 18558481 ~ 18558792 (+) |
| ntn1a | LOC105012279 | non-coding | downstream | 24919 | 18471857 ~ 18569139 (+) |
| G1150396 | NA | non-coding | downstream | 46804 | 18589357 ~ 18589749 (+) |
| G1150206 | NA | other | upstream | 286000 | 18253248 ~ 18256354 (+) |
| G1148286 | NA | other | upstream | 1832243 | 16708824 ~ 16710111 (+) |
| G1147590 | LOC106586738 | other | upstream | 2234821 | 16300976 ~ 16307533 (+) |
| G1147529 | NA | other | upstream | 2341727 | 16199471 ~ 16200627 (+) |
| G1150536 | NA | other | downstream | 284833 | 18827386 ~ 18827882 (+) |
| LOC110485813 | LOC106587120 | other | downstream | 309858 | 18852294 ~ 18855764 (+) |
| G1151061 | LOC106587131 | other | downstream | 354515 | 18897068 ~ 18920852 (+) |
| G1152196 | NA | other | downstream | 1510698 | 20053251 ~ 20072923 (+) |
| LOC110485866 | LOC106587513 | other | downstream | 1635450 | 20177543 ~ 20183351 (+) |
