G1151819 (LOC106587198)


Basic Information

Item Value
gene id G1151819
gene name LOC106587198
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 19241913 ~ 19242479 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1313568
AATTGCTCCACCTTACTACAGCGAGTGACAAGGAGAGGAGCTCAAAACAAAACACGGGGGAGAATCACACTCTACAACAACCACACCTAGGAACATTACACACTTATGTGGTGTCATACGCTATGCTTCTATAGGCAAATGTGTCAAAAACATTATGTTAGGGTAGGATGTTGACACAGCACAAAGTAAGGTCAGCTCAAATCCACAGTCAATGGTTTTCAATCGATCTCAAAACGACTGATTTTCCTCTACTAGGTATATTACCAGGTTTAAGTCTTTCCAGTCTTGTTACAGAGGAACTCCCCCGGTCTATATTTCAGGCTGAGGAGTTGTACGGTGGCATCTCACCTGAGGTGTACGAGCTGCTCCAGCCTTGGGCCAGGCCCAGGGAGTTTCCCCCCCAGGTGGATGAGGGCTTGGCTGGGTTGGTGAGGCCGGGAGGTGGCCTTGAAGGGGCTGTGTTGTTACGGGGCCCCTGGGGGACCTTCCACAGCTCGTGGGATAGAGAGGCCTGGGAGGGGTGGGAGATGGGCCCCGGGGACCAGGTGGACTTCATGTCAGATAGct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1313568 True 567 TUCP 0.52 1 19241913 19242479
Loading

Neighbor

gene id symbol gene type direction distance location
stx8 LOC106587090 coding downstream 624056 18569500 ~ 18617857 (-)
LOC110485801 LOC106587077 coding downstream 773830 18439488 ~ 18468083 (-)
LOC110485802 LOC106587067 coding downstream 812544 18411519 ~ 18429369 (-)
LOC110485803 LOC106587058 coding downstream 830534 18372254 ~ 18411379 (-)
LOC110485800 LOC106587011 coding downstream 895648 18253248 ~ 18346265 (-)
LOC110485822 LOC106587218 coding upstream 9349 19251828 ~ 19255374 (-)
LOC110485823 LOC106587227 coding upstream 16180 19258659 ~ 19265560 (-)
LOC110485824 LOC106564658 coding upstream 35377 19277856 ~ 19332983 (-)
LOC110485825 LOC106587236 coding upstream 92684 19335163 ~ 19369998 (-)
LOC110487518 rn135 coding upstream 127639 19370118 ~ 19372822 (-)
G1151818 NA non-coding downstream 840 19240634 ~ 19241073 (-)
G1151812 NA non-coding downstream 10373 19231311 ~ 19231540 (-)
G1151811 NA non-coding downstream 11798 19229785 ~ 19230115 (-)
G1151810 NA non-coding downstream 12485 19229205 ~ 19229428 (-)
G1151808 NA non-coding downstream 14580 19227011 ~ 19227333 (-)
G1151821 NA non-coding upstream 2588 19245067 ~ 19250539 (-)
G1151822 NA non-coding upstream 8732 19251211 ~ 19251550 (-)
G1151766 NA non-coding upstream 13638 19256117 ~ 19256515 (-)
G1151825 NA non-coding upstream 28474 19270953 ~ 19271171 (-)
G1151830 NA non-coding upstream 34740 19277219 ~ 19277475 (-)
G1151033 NA other downstream 388536 18852227 ~ 18853377 (-)
G1150846 NA other downstream 685840 18555781 ~ 18556073 (-)
G1150824 NA other downstream 718051 18523467 ~ 18523862 (-)
G1150558 LOC106564720 other downstream 1199310 18035160 ~ 18042603 (-)
G1148075 NA other downstream 2762826 16475282 ~ 16479087 (-)
G1151820 NA other upstream 366 19242845 ~ 19243074 (-)
LOC110485827 LOC106564656 other upstream 140790 19379408 ~ 19387327 (-)
LOC110485829 NA other upstream 146511 19388990 ~ 19392179 (-)
G1151940 LOC108272819 other upstream 413295 19655774 ~ 19656885 (-)

Expression

G1151819(LOC106587198) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.6.
End of interactive chart.

G1151819(LOC106587198) Expression in each Bioproject

Bar chart with 9 bars.
G1151819(LOC106587198) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 6.
End of interactive chart.

Co-expression Network