G1153597


Basic Information

Item Value
gene id G1153597
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 21508335 ~ 21508593 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1315645
ggctcacattaacacaattatcccagaaaccctagacccactccaatttgcataccgcccaaacagatccacagatgatacaatctctattgcactccactgccctttcccacctggacaaaaggaacacctacgtgagaatgctattcattgactacagctcagcgttcaacaccatagtgccctcaaagctcatcactaagctaaggatcctgggactaaacacatccctctgcaactgggtcctgggtCCTGCCCC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1315645 True 259 lncRNA 0.49 1 21508335 21508593

Neighbor

gene id symbol gene type direction distance location
LOC110485938 LOC106564925 coding upstream 19140 21484377 ~ 21489195 (+)
LOC110485937 NA coding upstream 42356 21465211 ~ 21465979 (+)
LOC110485931 LOC106564932 coding upstream 293720 21208787 ~ 21214615 (+)
LOC110485928 pp12c coding upstream 323155 21173895 ~ 21185180 (+)
LOC118938239 NA coding upstream 365270 21139834 ~ 21143065 (+)
LOC118938483 NA coding downstream 52226 21560819 ~ 21561997 (+)
LOC110485944 LOC106588224 coding downstream 459553 21968146 ~ 21974128 (+)
LOC110485943 LOC106588557 coding downstream 503418 22012011 ~ 22021092 (+)
LOC110485945 LOC105021619 coding downstream 532095 22040688 ~ 22042468 (+)
LOC101268942 NA coding downstream 582380 22090973 ~ 22091293 (+)
G1153584 NA non-coding upstream 8505 21499547 ~ 21499830 (+)
G1153575 NA non-coding upstream 15364 21492769 ~ 21492971 (+)
G1153571 LOC100380853 non-coding upstream 16560 21491538 ~ 21491775 (+)
G1153569 NA non-coding upstream 17335 21490749 ~ 21491000 (+)
G1153193 NA non-coding upstream 29799 21478336 ~ 21478536 (+)
G1153599 NA non-coding downstream 545 21509138 ~ 21509345 (+)
G1153608 NA non-coding downstream 63245 21571838 ~ 21574842 (+)
G1153612 NA non-coding downstream 74379 21582972 ~ 21592526 (+)
G1153670 NA non-coding downstream 135228 21643821 ~ 21649648 (+)
G1153672 NA non-coding downstream 136320 21644913 ~ 21650154 (+)
G1152985 LOC106588089 other upstream 351457 21155494 ~ 21156878 (+)
LOC110485920 LOC106588056 other upstream 447535 21057745 ~ 21068780 (+)
LOC110485904 LOC106564952 other upstream 628798 20860370 ~ 20880503 (+)
LOC110485890 LOC106587723 other upstream 1053350 20442132 ~ 20455056 (+)
G1153651 LOC106576875 other downstream 98899 21607492 ~ 21608829 (+)
G1154234 NA other downstream 649978 22158571 ~ 22159429 (+)
G1154335 NA other downstream 931043 22439636 ~ 22456349 (+)
G1154412 mcoln1 other downstream 1002786 22511379 ~ 22511740 (+)
c13h17orf67 LOC106564992 other downstream 1097715 22606256 ~ 22610371 (+)

Expression


Co-expression Network