Gene
RNA
| Item | Value |
|---|---|
| gene id | G1153670 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 21643821 ~ 21649648 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1315728 | False | 207 | lncRNA | 0.43 | 2 | 21643821 | 21648995 |
| TU1315727 | True | 416 | lncRNA | 0.44 | 2 | 21644254 | 21649648 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938483 | NA | coding | upstream | 81824 | 21560819 ~ 21561997 (+) |
| LOC110485938 | LOC106564925 | coding | upstream | 154626 | 21484377 ~ 21489195 (+) |
| LOC110485937 | NA | coding | upstream | 177842 | 21465211 ~ 21465979 (+) |
| LOC110485931 | LOC106564932 | coding | upstream | 429206 | 21208787 ~ 21214615 (+) |
| LOC110485928 | pp12c | coding | upstream | 458641 | 21173895 ~ 21185180 (+) |
| LOC110485944 | LOC106588224 | coding | downstream | 318498 | 21968146 ~ 21974128 (+) |
| LOC110485943 | LOC106588557 | coding | downstream | 362363 | 22012011 ~ 22021092 (+) |
| LOC110485945 | LOC105021619 | coding | downstream | 391040 | 22040688 ~ 22042468 (+) |
| LOC101268942 | NA | coding | downstream | 441325 | 22090973 ~ 22091293 (+) |
| LOC110485949 | NA | coding | downstream | 444312 | 22093904 ~ 22102095 (+) |
| G1153612 | NA | non-coding | upstream | 51295 | 21582972 ~ 21592526 (+) |
| G1153608 | NA | non-coding | upstream | 68979 | 21571838 ~ 21574842 (+) |
| G1153599 | NA | non-coding | upstream | 134476 | 21509138 ~ 21509345 (+) |
| G1153597 | NA | non-coding | upstream | 135228 | 21508335 ~ 21508593 (+) |
| G1153584 | NA | non-coding | upstream | 143991 | 21499547 ~ 21499830 (+) |
| G1153702 | NA | non-coding | downstream | 61586 | 21711234 ~ 21775704 (+) |
| G1153730 | NA | non-coding | downstream | 117898 | 21767546 ~ 21768239 (+) |
| G1153777 | NA | non-coding | downstream | 209232 | 21858880 ~ 21859216 (+) |
| G1154161 | NA | non-coding | downstream | 374036 | 22023684 ~ 22023891 (+) |
| G1154194 | NA | non-coding | downstream | 427081 | 22076729 ~ 22076956 (+) |
| G1153651 | LOC106576875 | other | upstream | 34992 | 21607492 ~ 21608829 (+) |
| G1152985 | LOC106588089 | other | upstream | 486943 | 21155494 ~ 21156878 (+) |
| LOC110485920 | LOC106588056 | other | upstream | 583021 | 21057745 ~ 21068780 (+) |
| LOC110485904 | LOC106564952 | other | upstream | 764284 | 20860370 ~ 20880503 (+) |
| G1154234 | NA | other | downstream | 508923 | 22158571 ~ 22159429 (+) |
| G1154335 | NA | other | downstream | 789988 | 22439636 ~ 22456349 (+) |
| G1154412 | mcoln1 | other | downstream | 861731 | 22511379 ~ 22511740 (+) |
| c13h17orf67 | LOC106564992 | other | downstream | 956660 | 22606256 ~ 22610371 (+) |
| G1155006 | LOC100136012 | other | downstream | 1309284 | 22958932 ~ 22959351 (+) |
