G1154217


Basic Information

Item Value
gene id G1154217
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 22122455 ~ 22237759 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1316340
ccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggctgaatactttcgcaaggcactgtacatagacttgaaatcactagCCACTCTAtaccgctctgacattgctcatccatatatttatatattcttaaattcctttacttagatttgtgtgttttgggtatatgttgtgaaattgtttgatattaatggttagatattactgcactgtcggatctagaaacacaagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1316340 True 288 lncRNA 0.35 3 22122455 22237759

Neighbor

gene id symbol gene type direction distance location
LOC110485949 NA coding upstream 20375 22093904 ~ 22102095 (+)
LOC101268942 NA coding upstream 31162 22090973 ~ 22091293 (+)
LOC110485945 LOC105021619 coding upstream 79987 22040688 ~ 22042468 (+)
LOC110485943 LOC106588557 coding upstream 101363 22012011 ~ 22021092 (+)
LOC110485944 LOC106588224 coding upstream 148327 21968146 ~ 21974128 (+)
LOC110485954 ten1 coding downstream 32702 22270081 ~ 22273346 (+)
LOC110485957 LOC106588316 coding downstream 86001 22323760 ~ 22340876 (+)
LOC110485959 LOC106588356 coding downstream 195679 22433438 ~ 22440891 (+)
LOC110485960 LOC106564900 coding downstream 210411 22448170 ~ 22451551 (+)
LOC118938241 NA coding downstream 216014 22453773 ~ 22457004 (+)
G1154194 NA non-coding upstream 45499 22076729 ~ 22076956 (+)
G1154161 NA non-coding upstream 98564 22023684 ~ 22023891 (+)
G1153777 NA non-coding upstream 263239 21858880 ~ 21859216 (+)
G1153702 NA non-coding upstream 346751 21711234 ~ 21775704 (+)
G1154278 NA non-coding downstream 7175 22244934 ~ 22252060 (+)
G1154294 NA non-coding downstream 76402 22314161 ~ 22314598 (+)
G1154276 LOC106588346 non-coding downstream 77347 22315106 ~ 22319544 (+)
G1154300 NA non-coding downstream 85347 22323106 ~ 22323523 (+)
G1153651 LOC106576875 other upstream 513626 21607492 ~ 21608829 (+)
LOC110485931 LOC106564932 other upstream 907843 21208787 ~ 21214615 (+)
G1152985 LOC106588089 other upstream 965577 21155494 ~ 21156878 (+)
LOC110485920 LOC106588056 other upstream 1061655 21057745 ~ 21068780 (+)
LOC110485904 LOC106564952 other upstream 1242918 20860370 ~ 20880503 (+)
G1154335 NA other downstream 201877 22439636 ~ 22456349 (+)
G1154412 mcoln1 other downstream 273620 22511379 ~ 22511740 (+)
c13h17orf67 LOC106564992 other downstream 368549 22606256 ~ 22610371 (+)
G1155006 LOC100136012 other downstream 721173 22958932 ~ 22959351 (+)
pitpnc1a LOC106585713 other downstream 1274167 23511706 ~ 23591433 (+)

Expression


Co-expression Network