G1154306


Basic Information

Item Value
gene id G1154306
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 22344536 ~ 22347208 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1316447
ATAGAGTTTATTGCTTGTTTTCTGCAAGGGTACAAGAGGTTTATAATTTCCGCTTTTATTTTTCTTATTTACAGTGTCAGTTGAAGCTCACAGAGCAGCTGATGTGAAAAAACTATgaacacactgtaataaataCAAAAGACTGAAATgagaaataaaaatgttaaaattTCAGACAAAAATTTAGCAAAAAGAAAACTAATTTACACACACAATACTTCCATACACACAGAATAAAGTGGGTTTTACACCATGTGAGAAATTGCACCGGTCGGCGACTAAATGTCGCAGGGCTCGGCTGGCAAAGCATGCTACAAGAAGCAACAGTCCATATGGTCTGATCTATTATCTAGAAACTGAGTGAAAGTCAAATGATGTTAAGACGTAGATAGCAGAAAACAGTACTGTGTGCGTGCACTGGACATGAGCTCTATGTGTGCATATCTACACGCGTATATATCTACATAAAAAGTCAATCAGTCCATTAACTATTTTGTAAATAGATGGAAGTTGCTGATTATAACGGCAACACAAGTCTGCGTGTGCAAAAAAAATCGTTTTTTTAATGCATCTTATTCATTTTCTGTAAAATTAAAAGGTTGCTTGTGATCCACCACATGAACAATATCTTATACTGTGCAAAAGCACCATTTCTAGGATACTTGATAATTGTCTTTCTGAAGAGAATCTGCTTTACCTTTGATCACACTGGACTGGGTCGATTTTATTTTGCATGTACGCAGGTGAATACAGTCCATGGTCATAGTCCACATCCACTGCTATTTAAACAGgcagcataaaaaaaaaaaacattcaacagAATTTTTCTCATGTCAACACACATTTTGCTCAGAAGGGACAAAATAATAGCAAATAAatattgtttttaaaaaaagtCCATTCATGCAAGGGTTGTGGTAGAGGCTCTATTAGGGTCATGTCTAGATGGCATACAGCGTGTCAAAAGGTGATTTTTCtatgcattttagctaaccctaacctaattctCATAACCTGCTAGGTTCATTCTCCTCAACCTTCTACAAAATGTCcattttgacaaaagctgtatcccttctagacTAAAAAAAATAACTCTAGCACTCTCTGGGCCCAACCTCAGTCTCTTAGTGGCCAAAAGGTTAAAGGTTATGCACTCAGCTCGCATTCAAGGAGAGGGTCACGGGTTTGACCTGACAACGGCTTCCATAACCAGAAGATCATCTCCCCTTCCACAAGTCAGCCTCACAAAGAAAGATGACTTCACCTGAGAATACAGAGGTCTGTGATAACACCAACATGCTAGCATGTACATGAATAGAAAGAGGAACAAGCCATATACAAAATAGGTATGTTTTTGTACACATGTATACTCAAAATTACAGGTAGATATACTTTCTTATCTGTATATTTCCATTGAATGCAGTATGGTTGGAATAAAACGTGGTATATTCATTTGAACTTAATATGAAGAAAGCACGTCCTTTGTCGCCATTCAGTTTGTAAAGTGCTCTAGAGTGGCAACTGGAAAAAACATCCTGCCATCTTAGGTTGGATGTCACTTTTGAAAACACTGACATCGTCCTTGAATTGCTTTCAACTAGCCTGGTCCCTGGGACAGAGTTCCACTCACTAGACAACGACCCACTTTGAGCGTTTGATAAGGAATTTCTATGGTGTGATTTAAAGGTACAGTGTGATATAATGATGTTTAGCGTTAAGTTCAACTCAGACTTTCACCAAAGCGCAACAGGTCTACTTCCATGTGTAGCTGGACGGGGTTAGGTGTTCAGGTTAGCATGTCTATTAGCTTTTGATGTCAAGAGGTGGCAGGAAGTTAGCTGTGTGAGACTGTATTGGTCATCAGTAAGACCTAGTTTCTCCTGGTTAGCTCATGGtcaggaacccccccccccccccccccccctggcccTAGTCATCTACTCAGTGTGGACCTTCATATTTCTCTAAAATACTCTCGTTGCAGTCTGGACCTTGGCATTCGATCGCACCAGACGACCCACAATAAAAGAAAAGATAAAGTGCTTTCACGGAACGCACATACTAGGGACCAGAGTCTTCCGGAAAAACTCCCGGTCCAACACAAAACTGGTTGTTCTGTGGATTTCACCATTATAATTACATACAAGCTATTACAAAAACAGAACTTAAAAAACTAAATAAAAGCTGGCATTCTCACAGGGTTTCAAGGTATGTAATCGTCACTCCTCTGTAGCAGCTGAAAAAGGAagtgatattttttttaaaagaaaggaaaaaaaataatgcagagagagagagagaggagaggagagggttccCGTGTGGTCTgcctctcagtctgtctgtccttctgcaGTCGGTCTCCATACTGTCCTGGGGAACTGGGCAGCAGAAAGGGGTGTGGTGACAATCCTCATGGGCGTGCCTGAACGTTGCAGGGTTCCCGTGGTGACAGCAGAGTCTATAGTCTTGCTGCGCTGACCGCACAAAAtacacacacgctgacacacacacacacacacttccccactgATGTGTCACTCATTCCACCGCAAAGCCACACGTCTCCTCGATGGCTGTCAGCAGCTTGTCGTACAGCTTGTCATAGTGCTCGTAGGCGGGAACGTCAATCCGGTTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1316447 True 2643 lncRNA 0.41 2 22344536 22347208
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110485957 LOC106588316 coding upstream 3660 22323760 ~ 22340876 (+)
LOC110485954 ten1 coding upstream 71190 22270081 ~ 22273346 (+)
aanat1 aanat coding upstream 144747 22196238 ~ 22199789 (+)
LOC110485951 LOC106588251 coding upstream 190703 22124284 ~ 22153833 (+)
LOC110485949 NA coding upstream 242456 22093904 ~ 22102095 (+)
LOC110485959 LOC106588356 coding downstream 86230 22433438 ~ 22440891 (+)
LOC110485960 LOC106564900 coding downstream 100962 22448170 ~ 22451551 (+)
LOC118938241 NA coding downstream 106565 22453773 ~ 22457004 (+)
LOC110485110 LOC106564993 coding downstream 186842 22534050 ~ 22542246 (+)
LOC110485964 LOC106588395 coding downstream 207454 22554662 ~ 22568808 (+)
G1154300 NA non-coding upstream 21013 22323106 ~ 22323523 (+)
G1154276 LOC106588346 non-coding upstream 24992 22315106 ~ 22319544 (+)
G1154294 NA non-coding upstream 29938 22314161 ~ 22314598 (+)
G1154278 NA non-coding upstream 92476 22244934 ~ 22252060 (+)
G1154337 NA non-coding downstream 112531 22459739 ~ 22462152 (+)
G1154338 LOC106588372 non-coding downstream 115055 22462263 ~ 22463777 (+)
G1154408 NA non-coding downstream 155539 22502747 ~ 22503029 (+)
G1154410 NA non-coding downstream 157307 22504515 ~ 22510295 (+)
G1154415 NA non-coding downstream 163887 22511095 ~ 22511316 (+)
G1154234 NA other upstream 185107 22158571 ~ 22159429 (+)
G1153651 LOC106576875 other upstream 735707 21607492 ~ 21608829 (+)
LOC110485931 LOC106564932 other upstream 1129924 21208787 ~ 21214615 (+)
G1152985 LOC106588089 other upstream 1187658 21155494 ~ 21156878 (+)
LOC110485920 LOC106588056 other upstream 1283736 21057745 ~ 21068780 (+)
G1154335 NA other downstream 92428 22439636 ~ 22456349 (+)
G1154412 mcoln1 other downstream 164171 22511379 ~ 22511740 (+)
c13h17orf67 LOC106564992 other downstream 259100 22606256 ~ 22610371 (+)
G1155006 LOC100136012 other downstream 611724 22958932 ~ 22959351 (+)
pitpnc1a LOC106585713 other downstream 1164718 23511706 ~ 23591433 (+)

Expression

G1154306 Expression in all Baseline Samples

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G1154306 Expression in each Bioproject

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G1154306 Expression in each Sample
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Co-expression Network