G1154415


Basic Information

Item Value
gene id G1154415
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 22511095 ~ 22511316 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1316564
CTTTTACATTCATTTGGATTAGAGTCTGTTTAAAGGGacacttcgggattttggcaatgaagtccTTCATCTACTTCCCTAGAGTCAGattaacttgtggataccatttttatgtctctgcgtgcagtttgaaggaagttgctaactagagtTAGCGCAATTGCCAAATAGCATTagagcaatgactggaagtccagGGTAACTGcaagcatgctagtagat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1316564 True 222 lncRNA 0.41 1 22511095 22511316
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118938241 NA coding upstream 54091 22453773 ~ 22457004 (+)
LOC110485960 LOC106564900 coding upstream 59544 22448170 ~ 22451551 (+)
LOC110485959 LOC106588356 coding upstream 70204 22433438 ~ 22440891 (+)
LOC110485957 LOC106588316 coding upstream 170219 22323760 ~ 22340876 (+)
LOC110485954 ten1 coding upstream 237749 22270081 ~ 22273346 (+)
LOC110485110 LOC106564993 coding downstream 22734 22534050 ~ 22542246 (+)
LOC110485964 LOC106588395 coding downstream 43346 22554662 ~ 22568808 (+)
trim25 LOC106564896 coding downstream 69421 22580737 ~ 22596273 (+)
c13h17orf67 LOC106564992 coding downstream 94940 22606256 ~ 22610371 (+)
LOC110485978 LOC106564882 coding downstream 569347 23080663 ~ 23325301 (+)
G1154410 NA non-coding upstream 800 22504515 ~ 22510295 (+)
G1154408 NA non-coding upstream 8066 22502747 ~ 22503029 (+)
G1154338 LOC106588372 non-coding upstream 47318 22462263 ~ 22463777 (+)
G1154337 NA non-coding upstream 48943 22459739 ~ 22462152 (+)
G1154306 NA non-coding upstream 163887 22344536 ~ 22347208 (+)
G1154416 NA non-coding downstream 4095 22515411 ~ 22516071 (+)
G1154421 NA non-coding downstream 9456 22520772 ~ 22521249 (+)
G1154422 LOC106588379 non-coding downstream 10270 22521586 ~ 22521839 (+)
G1154423 NA non-coding downstream 12346 22523662 ~ 22523898 (+)
G1154427 NA non-coding downstream 18873 22530189 ~ 22530394 (+)
G1154335 NA other upstream 54746 22439636 ~ 22456349 (+)
G1154234 NA other upstream 351666 22158571 ~ 22159429 (+)
G1153651 LOC106576875 other upstream 902266 21607492 ~ 21608829 (+)
LOC110485931 LOC106564932 other upstream 1296483 21208787 ~ 21214615 (+)
G1152985 LOC106588089 other upstream 1354217 21155494 ~ 21156878 (+)
G1154412 mcoln1 other downstream 63 22511379 ~ 22511740 (+)
G1155006 LOC100136012 other downstream 447616 22958932 ~ 22959351 (+)
pitpnc1a LOC106585713 other downstream 1000610 23511706 ~ 23591433 (+)
LOC110485992 LOC106585723 other downstream 1084602 23595876 ~ 23608606 (+)

Expression

G1154415 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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G1154415 Expression in each Bioproject

Bar chart with 10 bars.
G1154415 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 80.
End of interactive chart.

Co-expression Network