G1154947


Basic Information

Item Value
gene id G1154947
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 22852644 ~ 22852968 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1317166
GTAccctcccccagatctgtgcctcgacacaatactgTCTCGGAGCGCTAACAACAATTCcttcctcatggcttggtttttgctctgacatgcactgtcaacttttgtcacttatatagacaggtgtgtgcctttccaaatcatgtccaatcaattgaatttaccacaggtggacaccaatgaagttgtagaaacatctcaaggatgatccatggaaacaggatgcacctgagctcaatttcaagtctcatagcaaaaggtctgaatacttatgtaaatgtttttttttcttctaaacacctgttttcactttgtcattatgggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1317166 True 325 lncRNA 0.41 1 22852644 22852968

Neighbor

gene id symbol gene type direction distance location
c13h17orf67 LOC106564992 coding upstream 242273 22606256 ~ 22610371 (+)
trim25 LOC106564896 coding upstream 256371 22580737 ~ 22596273 (+)
LOC110485964 LOC106588395 coding upstream 283836 22554662 ~ 22568808 (+)
LOC110485110 LOC106564993 coding upstream 310398 22534050 ~ 22542246 (+)
LOC118938241 NA coding upstream 395640 22453773 ~ 22457004 (+)
LOC110485978 LOC106564882 coding downstream 227695 23080663 ~ 23325301 (+)
LOC110485983 LOC106585659 coding downstream 477266 23330234 ~ 23353922 (+)
LOC110485984 LOC106586345 coding downstream 514237 23367205 ~ 23391112 (+)
LOC110485985 LOC106585672 coding downstream 549428 23402396 ~ 23441245 (+)
pitpnc1a LOC106585713 coding downstream 658738 23511706 ~ 23591433 (+)
G1154912 NA non-coding upstream 56316 22793549 ~ 22796328 (+)
G1154909 LOC106588447 non-coding upstream 60342 22791472 ~ 22792302 (+)
G1154897 NA non-coding upstream 83352 22766338 ~ 22769292 (+)
G1154884 LOC100136012 non-coding upstream 100520 22751826 ~ 22752124 (+)
G1154882 NA non-coding upstream 103454 22748961 ~ 22749190 (+)
G1154951 NA non-coding downstream 4947 22857915 ~ 22858143 (+)
G1154954 NA non-coding downstream 11491 22864459 ~ 22864897 (+)
G1154968 NA non-coding downstream 49344 22902312 ~ 22902544 (+)
G1154970 NA non-coding downstream 50643 22903611 ~ 22903813 (+)
G1154973 NA non-coding downstream 56948 22909916 ~ 22910308 (+)
G1154412 mcoln1 other upstream 340904 22511379 ~ 22511740 (+)
G1154335 NA other upstream 396295 22439636 ~ 22456349 (+)
G1154234 NA other upstream 693215 22158571 ~ 22159429 (+)
G1153651 LOC106576875 other upstream 1243815 21607492 ~ 21608829 (+)
G1155006 LOC100136012 other downstream 105964 22958932 ~ 22959351 (+)
LOC110485992 LOC106585723 other downstream 742950 23595876 ~ 23608606 (+)
G1156089 NA other downstream 1145678 23998646 ~ 24003968 (+)
G1156247 NA other downstream 1473815 24326783 ~ 24328963 (+)

Expression


Co-expression Network