G1155440



Basic Information


Item Value
gene id G1155440
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 22872191 ~ 22872424 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1317713
GTCAGCGGGAACCTCCGACAGCATCTCTTTCctgagtctctctctttctctcagtcgctcgattctcttgctctctccctccctctctctgctcagtTCAGAAAGGCGAAGCCACCTTCCTTTATTCGGAGAGAAAGCTGTTCCTGTCTCAAACTCCTCACACATGAAACGCTAACTGTATGTAAATGTCGTCTTTGATTCTGTTTAATATATCCGGGGTACAAGGTATCAGAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1317713 True 234 lncRNA 0.47 1 22872191 22872424

Neighbor


gene id symbol gene type direction distance location
LOC110485111 LOC106588440 coding downstream 33283 22837985 ~ 22838908 (-)
LOC110485973 LOC106588447 coding downstream 37548 22766301 ~ 22834643 (-)
ccdc40 ccdc40 coding downstream 106036 22754475 ~ 22766155 (-)
LOC110485971 LOC106588435 coding downstream 126892 22728553 ~ 22745299 (-)
LOC110485970 LOC106588430 coding downstream 239827 22627746 ~ 22632364 (-)
LOC110485974 LOC106585623 coding upstream 43190 22915614 ~ 22993515 (-)
LOC110485975 apoh coding upstream 192998 23065422 ~ 23070647 (-)
LOC110485976 LOC106585643 coding upstream 198582 23071006 ~ 23077109 (-)
LOC110485982 LOC106567469 coding upstream 344640 23216183 ~ 23220256 (-)
LOC118938242 NA coding upstream 355619 23228043 ~ 23233566 (-)
G1155435 NA non-coding downstream 5633 22866287 ~ 22866558 (-)
G1155434 NA non-coding downstream 7302 22864449 ~ 22864889 (-)
G1155427 NA non-coding downstream 16696 22855191 ~ 22855495 (-)
G1155426 NA non-coding downstream 17293 22854569 ~ 22854898 (-)
G1155423 NA non-coding downstream 20036 22851860 ~ 22852155 (-)
G1155443 NA non-coding upstream 3222 22875646 ~ 22875868 (-)
G1155456 NA non-coding upstream 27063 22899487 ~ 22899688 (-)
G1155461 NA non-coding upstream 40042 22912466 ~ 22912681 (-)
G1155475 LOC100136012 non-coding upstream 86420 22958844 ~ 22959255 (-)
G1155486 NA non-coding upstream 106879 22979303 ~ 22979531 (-)
si:ch211-214c7.4 LOC106588372 other downstream 408516 22462260 ~ 22502075 (-)
LOC110485947 LOC106588570 other downstream 798766 22069722 ~ 22073496 (-)
LOC110485936 LOC106588110 other downstream 1406925 21262691 ~ 21465440 (-)
si:dkey-237i9.8 LOC106588103 other downstream 1611548 21247188 ~ 21260739 (-)
G1153336 NA other downstream 1884418 20984731 ~ 20987773 (-)
G1155674 NA other upstream 353790 23226214 ~ 23250232 (-)
G1155782 LOC106585672 other upstream 529955 23402379 ~ 23403632 (-)
G1156460 LOC106585723 other upstream 727083 23599507 ~ 23601690 (-)
LOC110485996 LOC106586353 other upstream 834333 23699036 ~ 23707634 (-)

Expression



Co-expression Network