Gene
RNA
| Item | Value |
|---|---|
| gene id | G1155443 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 22875646 ~ 22875868 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1317716 | True | 223 | lncRNA | 0.43 | 1 | 22875646 | 22875868 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485111 | LOC106588440 | coding | downstream | 36738 | 22837985 ~ 22838908 (-) |
| LOC110485973 | LOC106588447 | coding | downstream | 41003 | 22766301 ~ 22834643 (-) |
| ccdc40 | ccdc40 | coding | downstream | 109491 | 22754475 ~ 22766155 (-) |
| LOC110485971 | LOC106588435 | coding | downstream | 130347 | 22728553 ~ 22745299 (-) |
| LOC110485970 | LOC106588430 | coding | downstream | 243282 | 22627746 ~ 22632364 (-) |
| LOC110485974 | LOC106585623 | coding | upstream | 39746 | 22915614 ~ 22993515 (-) |
| LOC110485975 | apoh | coding | upstream | 189554 | 23065422 ~ 23070647 (-) |
| LOC110485976 | LOC106585643 | coding | upstream | 195138 | 23071006 ~ 23077109 (-) |
| LOC110485982 | LOC106567469 | coding | upstream | 341196 | 23216183 ~ 23220256 (-) |
| LOC118938242 | NA | coding | upstream | 352175 | 23228043 ~ 23233566 (-) |
| G1155440 | NA | non-coding | downstream | 3222 | 22872191 ~ 22872424 (-) |
| G1155435 | NA | non-coding | downstream | 9088 | 22866287 ~ 22866558 (-) |
| G1155434 | NA | non-coding | downstream | 10757 | 22864449 ~ 22864889 (-) |
| G1155427 | NA | non-coding | downstream | 20151 | 22855191 ~ 22855495 (-) |
| G1155426 | NA | non-coding | downstream | 20748 | 22854569 ~ 22854898 (-) |
| G1155456 | NA | non-coding | upstream | 23619 | 22899487 ~ 22899688 (-) |
| G1155461 | NA | non-coding | upstream | 36598 | 22912466 ~ 22912681 (-) |
| G1155475 | LOC100136012 | non-coding | upstream | 82976 | 22958844 ~ 22959255 (-) |
| G1155486 | NA | non-coding | upstream | 103435 | 22979303 ~ 22979531 (-) |
| G1155488 | NA | non-coding | upstream | 104352 | 22980220 ~ 22980451 (-) |
| si:ch211-214c7.4 | LOC106588372 | other | downstream | 411971 | 22462260 ~ 22502075 (-) |
| LOC110485947 | LOC106588570 | other | downstream | 802221 | 22069722 ~ 22073496 (-) |
| LOC110485936 | LOC106588110 | other | downstream | 1410380 | 21262691 ~ 21465440 (-) |
| si:dkey-237i9.8 | LOC106588103 | other | downstream | 1615003 | 21247188 ~ 21260739 (-) |
| G1153336 | NA | other | downstream | 1887873 | 20984731 ~ 20987773 (-) |
| G1155674 | NA | other | upstream | 350346 | 23226214 ~ 23250232 (-) |
| G1155782 | LOC106585672 | other | upstream | 526511 | 23402379 ~ 23403632 (-) |
| G1156460 | LOC106585723 | other | upstream | 723639 | 23599507 ~ 23601690 (-) |
| LOC110485996 | LOC106586353 | other | upstream | 830889 | 23699036 ~ 23707634 (-) |
