G1155010


Basic Information

Item Value
gene id G1155010
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 22964009 ~ 22964245 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1317235
GACTGGGGAACAGTCAGATTCCCCAAAGGTTATTACTCCTGCGTTATTCTCCCAGACTGCTATTGTGACTGACTTGTTGTGTTGTCTCCACACCTTGTCTGTATTGTTTGAACATCCATCTTCCTCTGTCCCCTGCTATAGTAGTGAAGTGACTTGAGGTTCACCACATCGTCACTGCAGGACAGCATGGTAGCTCTAAGACAAAAGACACAATTAGGATGATAACGTTTTCAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1317235 True 237 lncRNA 0.44 1 22964009 22964245

Neighbor

gene id symbol gene type direction distance location
c13h17orf67 LOC106564992 coding upstream 353638 22606256 ~ 22610371 (+)
trim25 LOC106564896 coding upstream 367736 22580737 ~ 22596273 (+)
LOC110485964 LOC106588395 coding upstream 395201 22554662 ~ 22568808 (+)
LOC110485110 LOC106564993 coding upstream 421763 22534050 ~ 22542246 (+)
LOC118938241 NA coding upstream 507005 22453773 ~ 22457004 (+)
LOC110485978 LOC106564882 coding downstream 116418 23080663 ~ 23325301 (+)
LOC110485983 LOC106585659 coding downstream 365989 23330234 ~ 23353922 (+)
LOC110485984 LOC106586345 coding downstream 402960 23367205 ~ 23391112 (+)
LOC110485985 LOC106585672 coding downstream 438151 23402396 ~ 23441245 (+)
pitpnc1a LOC106585713 coding downstream 547461 23511706 ~ 23591433 (+)
G1155008 NA non-coding upstream 1672 22962011 ~ 22962337 (+)
G1155004 NA non-coding upstream 9600 22954170 ~ 22954409 (+)
G1154995 NA non-coding upstream 21203 22942593 ~ 22942806 (+)
G1154992 NA non-coding upstream 23495 22940287 ~ 22940514 (+)
G1154973 NA non-coding upstream 53701 22909916 ~ 22910308 (+)
G1155012 NA non-coding downstream 1619 22965864 ~ 22966067 (+)
G1155017 NA non-coding downstream 17985 22982230 ~ 22982430 (+)
G1155018 NA non-coding downstream 18347 22982592 ~ 22982900 (+)
G1155021 apoh non-coding downstream 20440 22984685 ~ 23070622 (+)
G1155020 NA non-coding downstream 106664 23070909 ~ 23074684 (+)
G1155006 LOC100136012 other upstream 4658 22958932 ~ 22959351 (+)
G1154412 mcoln1 other upstream 452269 22511379 ~ 22511740 (+)
G1154335 NA other upstream 507660 22439636 ~ 22456349 (+)
G1154234 NA other upstream 804580 22158571 ~ 22159429 (+)
LOC110485992 LOC106585723 other downstream 631673 23595876 ~ 23608606 (+)
G1156089 NA other downstream 1034401 23998646 ~ 24003968 (+)
G1156247 NA other downstream 1362538 24326783 ~ 24328963 (+)
G1157117 NA other downstream 1799857 24764102 ~ 24764346 (+)

Expression


Co-expression Network