G1155674


Basic Information

Item Value
gene id G1155674
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 23226214 ~ 23250232 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1317955
GCGATTTCACCCGTTTGGCAAAAACACATCACCCCACTCTGTGTTCAGTGTTTTGCCTTTCCTGCGAGCATttcaccctctctgttctctccaacTGCCCCGTTTGATACcttactctctcgctctcttcatctccctcacTCATCCCTCTCTAagtgctccctctctttctctgtttctctgtttctctctcattctctgtttcgctctctcgCCCTCAGCCTCTCGGTCTCTCCTTCTCCAGGCATCATGGAGAAGTCAAGTGGAGCCACCCTTCTTCCTGTGCCAGATTCGCAGTCACCACCTGTCCTCCGTGGAGACATTCTGGTGACGAGTGACGTCACGGACGCTATTGGGGGTCTCCCTGATGCAGGAAGGAGAGGTGTCATATGGCCAGCTGTCCTCCTGGCCATTACCAATGAAGATAACTTGTAACTGGAGATTCCTTCAAAACAATTGCCTACAGTTAACGTGTAGGGCACTGcaaggttgggtgaccagggTCATCTGGGACTGCCTCCTGGAGGAATTCAGGTGTGTGAAGGCTACCTGTGTCCTGCATAACTTAATGAGGATGGACACGAGGACCAGGAGGGGATCTGCAGCTCGCCACCGTGTCCCAGAGGAGAAGTCTGCTGCTCTGCAGGATGTTTCAAAGATGGGGTCCAACAACGAAGCAAGAGAGGCAATCCGTGTGCGGAAGATCTTCACTTCTTCGAAGAGGGTGCTGTTCCCTGGTAACAACATAGACTAGACTATGCACAATCAAAGGCTCTTTAAGAGCCATTCACATTGCAATAAGAGTATTCTTTCATTTACTTAGCtatgtcaactgcagttattCAATTCCCAGTTTCTACTTCTCAGGTCAGGGTGCTGTTTAGGTAAGGTTGTGATGTCTGTACACAAACAAAACTGGCTATTTTAAATAACCCATATTGAAAAAATGTAGAACAATTAGACACCCTATAACCCACACACTCATGTatcaatctgattgatggattgtgttGTGCAGTAATCAGGCTCAGGTGTATAAATGtggctccttccaccttcaaagaataggcaagagggccaaccatggagaatagtaagacacttCATTATTTCTATAACTACGCTATATTGTTTGTCCTCGAGTGTCTGTtcatgtttttcagcataaagtactctgcagccacttagtgtgatgtggacaccaggtgagaccacacacacagattcctgttgaacTCATTTTCccaataacagtctctctccttcacttcctcctcttctccctaaatcctctaggttatatcagctgagTCGGTGAACCACTCCCACATCTGAACTGGCgacagagggcacagcatgatcagagatatgttttgatgtgagagaggatgccaaccCCCAGGCCCATCATCGTCACCTCACCCATAATGCAATTGTGATGAACAGAGAATATTTGGGTAGCACTGTGACtcattaatcatatgctgccTTCCCTGCCCctatgttcttacctctttccctttgtcttttacacctctctctccacctctttcttcctctgttttcATAATGCACAACAGATaagcattgaagtacagattgaacttgtatttataatattacaaatataatatttattatgcatgtatttataacacttggataatgaacttctttcaataaagcgtttcacattctctactggggaggcaggtagcctagtggttagagtgttggactagtaaccgaaagggtgcaagatcgaatccctgagctgacaaggtaaaagtctgttgttctgccccttagcaaggcagttaacccatggttcttaggccgtcattgaaaataagaatttgatcttaactgacttgcctagttaaataaaggtaacataaaaaaaatactacacctatcctgtgtttatcagatcaatgcagatgaagggcATTAGATAATGAGATGAACCGGTTTTAGACTATATacattgtcatgacgttgccctctttgggtacagcaagcaccatccccctctccctgcctctctctgctccttcaaCCAGGCTGCTGTTGTCagtgaggtcgtaaattcctcGAAGAGATTGTCTCCTCATTGACACAGTATAAGACacagagtgaattttcatagagaacaaaggaatttcatctacctcacagaacttgaggtctgaacaaatttcttgttccggagaaggtataaaagatcggtgaagaatccagctacgaactggtctgtttgttacaacttggggaaactcatgggagacggtgcggccacattaccataactctgtttatataatagcctcagatatgaggtttacatctaattgttgtataagatgaatgagtgagaatgatactgtttgtaaaattgtgtaatgtgattttggactgattaatgaaggaaactccaattcccttttgagtttaactaaatcagaggaccgcccatgagcccagttaggatcaggcatcctgggacagccccttttctgcaattccgaataaaacccaactttgagaaattctaAGTAGACCATGTTTCCCTCAATTACGagtacaaaggttgcagaccagactgctgaatctttaaaccataccacgtggttaaactcttattctgtcggtatcgatagtctaagaacaagtctttgatattatttactagtctgcagctaggaattcggtatcattgaacacgAAGAACGACAACTGCCGAAACACccattctacaacaacatgaatgaatgtcactctgaaatacccactataaccacgacagagagagacgaACAATTCAACAAaataaacaaacttttcaacagcgacCAAGACAACACACTGAGcataaatacagtggggagaacaagtatttgatacactgcggATTTTGCagggtttcctacttacaaagcatgtagaggtctgtcatttttatcataggtacacttcaactgtgagacggaatccaaaacaaaaatccagaaaatcacattgtatgatttttaagtaattaatttgcattttattgcatgacatgattatttgatacatcagaaaagcagaacttaatatttggtacagaatatatatgtttgcaattacagagatcatatgtttcctgtagttcttgaccaggtttgcacacactgcagcagggattttggcccactcctccatacagactttctccagatccttcaggtttcggggctgccgctgggcaatacggactttcagctccctccaaagattttctatttaactatgccactttgtttacatactcatctcatatgtatatactgcactcaatacaatctactgtatcttgcctatgccgctctgtaccatcactcattcatatatctttatgtacagtgccttgcgaaagtatttggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatg
>TU1317957
GCGATTTCACCCGTTTGGCAAAAACACATCACCCCACTCTGTGTTCAGTGTTTTGCCTTTCCTGCGAGCATttcaccctctctgttctctccaacTGCCCCGTTTGATACcttactctctcgctctcttcatctccctcacTCATCCCTCTCTAagtgctccctctctttctctgtttctctgtttctctctcattctctgtttcgctctctcgCCCTCAGCCTCTCGGTCTCTCCTTCTCCAGGCATCATGGAGAAGTCAAGTGGAGCCACCCTTCTTCCTGTGCCAGATTCGCAGTCACCACCTGTCCTCCGTGGAGACATTCTGGTGACGAGTGACGTCACGGACGCTATTGGGGGTCTCCCTGATGCAGGAAGGAGAGGTGTCATATGGCCAGCTGTCCTCCTGGCCATTACCAATGAAGATAACTTGTAACTGGAGATTCCTTCAAAACAATTGCCTACAGTTAACGTGTAGGGCACTGcaaggttgggtgaccagggTCATCTGGGACTGCCTCCTGGAGGAATTCAGGTGTGTGAAGGCTACCTGTGTCCTGCATAACTTAATGAGGATGGACACGAGGACCAGGAGGGGATCTGCAGCTCGCCACCGTGTCCCAGAGGAGAAGTCTGCTGCTCTGCAGGATGTTTCAAAGATGGGGTCCAACAACGAAGCAAGAGAGGCAATCCGTGTGCGGAAGATCTTCACTTCTTCGAAGAGGGTGCTGTTCCCTGgttatatcagctgagTCGGTGAACCACTCCCACATCTGAACTGGCgacagagggcacagcatgatcagagatatgttttgatgtgagagaggatgccaaccCCCAGGCCCATCATCGTCACCTCACCCATAATGCAATTGTGATGAACAGAGAATATTTGGGTAGCACTGTGACtcattaatcatatgctgccTTCCCTGCCCctatgttcttacctctttccctttgtcttttacacctctctctccacctctttcttcctctgttttcATAATGCACAACAGATaagcattgaagtacagattgaacttgtatttataatattacaaatataatatttattatgcatgtatttataacacttggataatgaacttctttcaataaagcgtttcacattctctactggggaggcaggtagcctagtggttagagtgttggactagtaaccgaaagggtgcaagatcgaatccctgagctgacaaggtaaaagtctgttgttctgccccttagcaaggcagttaacccatggttcttaggccgtcattgaaaataagaatttgatcttaactgacttgcctagttaaataaaggtaacataaaaaaaatactacacctatcctgtgtttatcagatcaatgcagatgaagggcATTAGATAATGAGATGAACCGGTTTTAGACTATATacattgtcatgacgttgccctctttgggtacagcaagcaccatccccctctccctgcctctctctgctccttcaaCCAGGCTGCTGTTGTCagtgaggtcgtaaattcctcGAAGAGATTGTCTCCTCATTGACACAGTATAAGACacagagtgaattttcatagagaacaaaggaatttcatctacctcacagaacttgaggtctgaacaaatttcttgttccggagaaggtataaaagatcggtgaagaatccagctacgaactggtctgtttgttacaacttggggaaactcatgggagacggtgcggccacattaccataactctgtttatataatagcctcagatatgaggtttacatctaattgttgtataagatgaatgagtgagaatgatactgtttgtaaaattgtgtaatgtgattttggactgattaatgaaggaaactccaattcccttttgagtttaactaaatcagaggaccgcccatgagcccagttaggatcaggcatcctgggacagccccttttctgcaattccgaataaaacccaactttgagaaattctaAGTAGACCATGTTTCCCTCAATTACGagtacaaaggttgcagaccagactgctgaatctttaaaccataccacgtggttaaactcttattctgtcggtatcgatagtctaagaacaagtctttgatattatttactagtctgcagctaggaattcggtatcattgaacacgAAGAACGACAACTGCCGAAACACccattctacaacaacatgaatgaatgtcactctgaaatacccactataaccacgacagagagagacgaACAATTCAACAAaataaacaaacttttcaacagcgacCAAGACAACACACTGAGcataaatacagtggggagaacaagtatttgatacactgcggATTTTGCagggtttcctacttacaaagcatgtagaggtctgtcatttttatcataggtacacttcaactgtgagacggaatccaaaacaaaaatccagaaaatcacattgtatgatttttaagtaattaatttgcattttattgcatgacatgattatttgatacatcagaaaagcagaacttaatatttggtacagaatatatatgtttgcaattacagagatcatatgtttcctgtagttcttgaccaggtttgcacacactgcagcagggattttggcccactcctccatacagactttctccagatccttcaggtttcggggctgccgctgggcaatacggactttcagctccctccaaagattttctatttaactatgccactttgtttacatactcatctcatatgtatatactgcactcaatacaatctactgtatcttgcctatgccgctctgtaccatcactcattcatatatctttatgtacagtgccttgcgaaagtatttggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatg
>TU1317959
GCGATTTCACCCGTTTGGCAAAAACACATCACCCCACTCTGTGTTCAGTGTTTTGCCTTTCCTGCGAGCATttcaccctctctgttctctccaacTGCCCCGTTTGATACcttactctctcgctctcttcatctccctcacTCATCCCTCTCTAagtgctccctctctttctctgtttctctgtttctctctcattctctgtttcgctctctcgCCCTCAGCCTCTCGGTCTCTCCTTCTCCAGGCATCATGGAGAAGTCAAGTGGAGCCACCCTTCTTCCTGTGCCAGATTCGCAGTCACCACCTGTCCTCCGTGGAGACATTCTGGTGACGAGTGACGTCACGGACGCTATTGGGGGTCTCCCTGATGCAGGAAGGAGAGGTGTCATATGGCCAGCTGTCCTCCTGGCCATTACCAATGAAGATAACTTGTAACTGGAGATTCCTTCAAAACAATTGCCTACAGTTAACGTGTAGGGCACTGcaaggttgggtgaccagggTCATCTGGGACTGCCTCCTGGAGGAATTCAGGTGTGTGAAGGCTACCTGTGTCCTGCATAACTTGAGGATGGACACGAGGACCAGGAGGGGATCTGCAGCTCGCCACCGTGTCCCAGAGGAGAAGTCTGCTGCTCTGCAGGATGTTTCAAAGATGGGGTCCAACAACGAAGCAAGAGAGGCAATCCGTGTGCGGAAGATCTTCACTTCTTCGAAGAGGGTGCTGTTCCCTGgttatatcagctgagTCGGTGAACCACTCCCACATCTGAACTGGCgacagagggcacagcatgatcagagatatgttttgatgtgagagaggatgccaaccCCCAGGCCCATCATCGTCACCTCACCCATAATGCAATTGTGATGAACAGAGAATATTTGGGTAGCACTGTGACtcattaatcatatgctgccTTCCCTGCCCctatgttcttacctctttccctttgtcttttacacctctctctccacctctttcttcctctgttttcATAATGCACAACAGATaagcattgaagtacagattgaacttgtatttataatattacaaatataatatttattatgcatgtatttataacacttggataatgaacttctttcaataaagcgtttcacattctctactggggaggcaggtagcctagtggttagagtgttggactagtaaccgaaagggtgcaagatcgaatccctgagctgacaaggtaaaagtctgttgttctgccccttagcaaggcagttaacccatggttcttaggccgtcattgaaaataagaatttgatcttaactgacttgcctagttaaataaaggtaacataaaaaaaatactacacctatcctgtgtttatcagatcaatgcagatgaagggcATTAGATAATGAGATGAACCGGTTTTAGACTATATacattgtcatgacgttgccctctttgggtacagcaagcaccatccccctctccctgcctctctctgctccttcaaCCAGGCTGCTGTTGTCagtgaggtcgtaaattcctcGAAGAGATTGTCTCCTCATTGACACAGTATAAGACacagagtgaattttcatagagaacaaaggaatttcatctacctcacagaacttgaggtctgaacaaatttcttgttccggagaaggtataaaagatcggtgaagaatccagctacgaactggtctgtttgttacaacttggggaaactcatgggagacggtgcggccacattaccataactctgtttatataatagcctcagatatgaggtttacatctaattgttgtataagatgaatgagtgagaatgatactgtttgtaaaattgtgtaatgtgattttggactgattaatgaaggaaactccaattcccttttgagtttaactaaatcagaggaccgcccatgagcccagttaggatcaggcatcctgggacagccccttttctgcaattccgaataaaacccaactttgagaaattctaAGTAGACCATGTTTCCCTCAATTACGagtacaaaggttgcagaccagactgctgaatctttaaaccataccacgtggttaaactcttattctgtcggtatcgatagtctaagaacaagtctttgatattatttactagtctgcagctaggaattcggtatcattgaacacgAAGAACGACAACTGCCGAAACACccattctacaacaacatgaatgaatgtcactctgaaatacccactataaccacgacagagagagacgaACAATTCAACAAaataaacaaacttttcaacagcgacCAAGACAACACACTGAGcataaatacagtggggagaacaagtatttgatacactgcggATTTTGCagggtttcctacttacaaagcatgtagaggtctgtcatttttatcataggtacacttcaactgtgagacggaatccaaaacaaaaatccagaaaatcacattgtatgatttttaagtaattaatttgcattttattgcatgacatgattatttgatacatcagaaaagcagaacttaatatttggtacagaatatatatgtttgcaattacagagatcatatgtttcctgtagttcttgaccaggtttgcacacactgcagcagggattttggcccactcctccatacagactttctccagatccttcaggtttcggggctgccgctgggcaatacggactttcagctccctccaaagattttctatttaactatgccactttgtttacatactcatctcatatgtatatactgcactcaatacaatctactgtatcttgcctatgccgctctgtaccatcactcattcatatatctttatgtacagtgccttgcgaaagtatttggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1317955 False 3530 TUCP 0.42 3 23226214 23250232
TU1317957 False 2971 TUCP 0.43 4 23226214 23250232
TU1317959 True 2968 TUCP 0.43 5 23226214 23250232

Neighbor

gene id symbol gene type direction distance location
LOC110485982 LOC106567469 coding downstream 5958 23216183 ~ 23220256 (-)
LOC110485976 LOC106585643 coding downstream 149105 23071006 ~ 23077109 (-)
LOC110485975 apoh coding downstream 155567 23065422 ~ 23070647 (-)
LOC110485974 LOC106585623 coding downstream 232699 22915614 ~ 22993515 (-)
LOC110485111 LOC106588440 coding downstream 387306 22837985 ~ 22838908 (-)
LOC110485986 LOC106585679 coding upstream 192255 23442487 ~ 23499325 (-)
LOC110485989 LOC106585705 coding upstream 249770 23500002 ~ 23506509 (-)
trnas-aga-59 NA coding upstream 360480 23610712 ~ 23610793 (-)
LOC110485994 LOC106585744 coding upstream 421446 23671678 ~ 23677780 (-)
trnar-ccg-26 NA coding upstream 429233 23679465 ~ 23679537 (-)
G1155571 NA non-coding downstream 118144 23105008 ~ 23108070 (-)
G1155513 NA non-coding downstream 214712 23011185 ~ 23011502 (-)
G1155491 NA non-coding downstream 244169 22981835 ~ 22982045 (-)
G1155490 NA non-coding downstream 244444 22981539 ~ 22981770 (-)
G1155489 NA non-coding downstream 245037 22980968 ~ 22981177 (-)
G1155704 NA non-coding upstream 70914 23321146 ~ 23325274 (-)
G1155773 NA non-coding upstream 134864 23385096 ~ 23385296 (-)
G1155774 NA non-coding upstream 137897 23388129 ~ 23388341 (-)
G1155776 NA non-coding upstream 138991 23389223 ~ 23389559 (-)
G1155777 NA non-coding upstream 140302 23390534 ~ 23392324 (-)
si:ch211-214c7.4 LOC106588372 other downstream 762539 22462260 ~ 22502075 (-)
LOC110485947 LOC106588570 other downstream 1152789 22069722 ~ 22073496 (-)
LOC110485936 LOC106588110 other downstream 1760948 21262691 ~ 21465440 (-)
si:dkey-237i9.8 LOC106588103 other downstream 1965571 21247188 ~ 21260739 (-)
G1155782 LOC106585672 other upstream 152147 23402379 ~ 23403632 (-)
G1156460 LOC106585723 other upstream 349275 23599507 ~ 23601690 (-)
LOC110485996 LOC106586353 other upstream 456525 23699036 ~ 23707634 (-)
LOC110486013 LOC106585880 other upstream 836472 24086694 ~ 24134220 (-)
G1156864 NA other upstream 1048687 24298919 ~ 24300232 (-)

Expression


Co-expression Network