G1155022


Basic Information

Item Value
gene id G1155022
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 23354329 ~ 23356866 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1317255
aaccccttgaatgagtagctgttgTACAACTTTTGACCGGCAGTGTACCTGTACAAGAATTACTGCTCTTTGGAAATTGAGTAAATCACtgaaatgtaaaatgtatatttaaaacaaGTTTTGTATCAGATTGCATATGCATATAAAGTGTACAGTGACATAGCCAGATGCAAGCTGTTTGCTTTTGGATtcttggttgtgtcccaaatggcaccctattccctatatagtgcactacttttgaccatggccatAAGTAGTttgctatgtagggaatagggtgccgttagGAATGTGACATTGATTAAGGAAATACCCTGTCAGAAAAAAATCTTAGGTGTTAAATGTGACTAACTTGAAAATACATCTTGTgtattacatacaccttagccaaatacatttaaactcagtttttcccaattcctgacatttaatcctagtaaagattccctgtcttaggtcagctaggatcaccactttattttaagaatgtgaaatgtcaaaataatagtagagggaatgatttatttcagcttttatttctttcatcacattcccagtgggtcagaagtttacatacactcaattagtatttggtagcattgcctttaaattatttaacttgggtcaaacgttttgggtagccttccacaagcttcccagaataagttgggtgaattttggcccattcctcctgacagaacttgtgtaactgagtcaggtttgtaggcctccttgctcgcaaacgctttttcagttcggcccacaaatgttctattggaaTGAGGTacgggctttgtgatggcaactccaataccttgacattgttgtccttcagccattttgccacaactttggaagtatgcttgtggtcattgtccatctggaagacccatttgcgaccaagctttaactttaactttatggcggttttggagcagtggcttcttccttgctgagcggcctttcaggtacacctccaattgactcaaattatgtcaattagcctatcagaagcttctcaagctgtttaaaggcgcaatcaacttagtgtatgttaacgtctgacccactggtattgtgatacagtggaatcatctgtctgtaaacaattgttggaaaaatgacttgtgtcatgcacaaagtagatgtcctaaccgacttgccaaaactatagtttgttaacaagacatttctgGAGTggatgattccaacctaagtgtatgtaaacttctgacttcaactgtacattataTATTTAAGCTACAGTATTTATGCCATAGTAAGACCTCATAGTTCCATCTTTGTACATTTAAAAAGTAAATTATCAATTTAGAGGACAACTATTGTCTGTGTTCAATGTTGCGACTGATGTTAGTAATTGTTATTTAGGAACAATATTGTTTTTTCTTGTTCAGTAGTCTCATTGACAGCCTAGAAGTTTCTACCCACAGTGTTCAACATGATAAATATTAGATTAGCTATATAAGGGAGGGGGGGGAATAGCGAAAAAGGAGAAGGGTCTTGGAGTGGAGAAGCGTGTGGCTATTTTGAAAAACATCTGATAGTGTTATGGTTGTTCCACAGGCAACATTTCTACATGGGATCTCCATAAAATACATACGGCATGTTTCCACTTGATAACTTTGTTCAGTTTAAAGGATAAGTATTatattttgagaaaaaaaaatcaagtgTGAAAACTACCAAACAAATCTGAAATATCTCACGTTGTCAAACACTATATCAGTGTTTCTTCAGATTAGAACAGTCTTctcaatatttgttttattctcCTTTGTGTGAACGCTGTATATATTTAATCATCAACATGTAAATGGACTGCAACAACTTTTATATAGACTATTACATGTGTAAGTTAGAACCATCTGGATGTTTTACTCATTTGTAGCCATGGTGAACCCGTTATCTACTCGGTGTGTCTATATTGCCTGTGGTTATAGCTGCTTTGCCTCTTGCATCGGATACTCAGAATGTGAGATTTTGCATGTATTGTTTTACACACACATTTTTAGAAAAGATTCAAGTCAGAGAAgtggtatttttattttttacaaagagTCATTTTCACGATGTTCAATGTGCGATCTACTGTATTATATCTCTGAAAATAAAGATAAACTGCTGTATTTGATGAAGTAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1317255 True 2163 lncRNA 0.37 2 23354329 23356866

Neighbor

gene id symbol gene type direction distance location
LOC110485983 LOC106585659 coding upstream 407 23330234 ~ 23353922 (+)
LOC110485978 LOC106564882 coding upstream 29028 23080663 ~ 23325301 (+)
c13h17orf67 LOC106564992 coding upstream 743958 22606256 ~ 22610371 (+)
trim25 LOC106564896 coding upstream 758056 22580737 ~ 22596273 (+)
LOC110485964 LOC106588395 coding upstream 785521 22554662 ~ 22568808 (+)
LOC110485984 LOC106586345 coding downstream 10339 23367205 ~ 23391112 (+)
LOC110485985 LOC106585672 coding downstream 45530 23402396 ~ 23441245 (+)
pitpnc1a LOC106585713 coding downstream 154840 23511706 ~ 23591433 (+)
LOC110485992 LOC106585723 coding downstream 239010 23595876 ~ 23608606 (+)
LOC110485993 LOC106585727 coding downstream 254959 23611825 ~ 23668173 (+)
G1155186 NA non-coding upstream 27701 23326420 ~ 23326628 (+)
G1155118 NA non-coding upstream 158237 23195106 ~ 23196092 (+)
G1155117 NA non-coding upstream 158891 23194756 ~ 23195438 (+)
G1155103 NA non-coding upstream 168396 23185607 ~ 23185933 (+)
G1155020 NA non-coding upstream 279645 23070909 ~ 23074684 (+)
G1155225 NA non-coding downstream 26940 23383806 ~ 23384038 (+)
G1155227 NA non-coding downstream 28225 23385091 ~ 23385435 (+)
G1155212 NA non-coding downstream 36244 23393110 ~ 23395421 (+)
G1155211 NA non-coding downstream 39698 23396564 ~ 23396662 (+)
G1155228 NA non-coding downstream 42076 23398942 ~ 23399152 (+)
G1155006 LOC100136012 other upstream 394978 22958932 ~ 22959351 (+)
G1154412 mcoln1 other upstream 842589 22511379 ~ 22511740 (+)
G1154335 NA other upstream 897980 22439636 ~ 22456349 (+)
G1154234 NA other upstream 1194900 22158571 ~ 22159429 (+)
G1156089 NA other downstream 641780 23998646 ~ 24003968 (+)
G1156247 NA other downstream 969917 24326783 ~ 24328963 (+)
G1157117 NA other downstream 1407236 24764102 ~ 24764346 (+)

Expression


Co-expression Network