G1155229


Basic Information

Item Value
gene id G1155229
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 23399485 ~ 23400062 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1317471
gaattatagatatacttctccttaatgcatccactgtgtcagatttcaaaaaagctttacggaaaaagcacaccatgcaataatctgagtacagcgctcaggcaccaaaacaagccatacagatacccgccatgttgtggagtcaacagaagtcagaaatagcattataaatattcacttacctttgatgatcttcatcggaatgcactcccaggaatcccagttccacaataaatgtttgttttgttcgataaagtccatcatttatgtccaaaaacctcctttttgttctTGCATTTAATTCACAAATTCAAATTCACGAGGCGCAGGCACttagtccagacgaaaagtcaaaaagttccattacagttcgtagaaacatgtcaaatgatgtatagacaattcctttgacaaccggacaattcctttgtctttagaaatgaaaaggaacgcaACTCGCTCTCACGACCGCACGCATgacttagctcatggcattctgccagaccccttagtcaaacagctcttattcactcccccttcacagtagaagccggaaacaaggttctaaagactgttga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1317471 True 578 lncRNA 0.40 1 23399485 23400062

Neighbor

gene id symbol gene type direction distance location
LOC110485984 LOC106586345 coding upstream 8373 23367205 ~ 23391112 (+)
LOC110485983 LOC106585659 coding upstream 45563 23330234 ~ 23353922 (+)
LOC110485978 LOC106564882 coding upstream 74184 23080663 ~ 23325301 (+)
c13h17orf67 LOC106564992 coding upstream 789114 22606256 ~ 22610371 (+)
trim25 LOC106564896 coding upstream 803212 22580737 ~ 22596273 (+)
LOC110485985 LOC106585672 coding downstream 2334 23402396 ~ 23441245 (+)
pitpnc1a LOC106585713 coding downstream 111644 23511706 ~ 23591433 (+)
LOC110485992 LOC106585723 coding downstream 195814 23595876 ~ 23608606 (+)
LOC110485993 LOC106585727 coding downstream 211763 23611825 ~ 23668173 (+)
LOC110485995 ima2 coding downstream 279692 23679754 ~ 23685732 (+)
G1155228 NA non-coding upstream 333 23398942 ~ 23399152 (+)
G1155211 NA non-coding upstream 2823 23396564 ~ 23396662 (+)
G1155212 NA non-coding upstream 4064 23393110 ~ 23395421 (+)
G1155227 NA non-coding upstream 14050 23385091 ~ 23385435 (+)
G1155225 NA non-coding upstream 15447 23383806 ~ 23384038 (+)
G1155277 NA non-coding downstream 57141 23457203 ~ 23457653 (+)
G1155294 NA non-coding downstream 73605 23473667 ~ 23474442 (+)
G1155309 NA non-coding downstream 98761 23498823 ~ 23499217 (+)
G1155279 psd12 non-coding downstream 102011 23502073 ~ 23506480 (+)
G1155343 NA non-coding downstream 169013 23569075 ~ 23569392 (+)
G1155006 LOC100136012 other upstream 440134 22958932 ~ 22959351 (+)
G1154412 mcoln1 other upstream 887745 22511379 ~ 22511740 (+)
G1154335 NA other upstream 943136 22439636 ~ 22456349 (+)
G1154234 NA other upstream 1240056 22158571 ~ 22159429 (+)
G1156089 NA other downstream 598584 23998646 ~ 24003968 (+)
G1156247 NA other downstream 926721 24326783 ~ 24328963 (+)
G1157117 NA other downstream 1364040 24764102 ~ 24764346 (+)

Expression


Co-expression Network