G1155309


Basic Information

Item Value
gene id G1155309
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 23498823 ~ 23499217 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1317557
AGTACATAGTGAGAAAATGGTGCTGTCGACAGCAGTTTGCACGTCAGCCAAAATAGGGCCCTTCGCTTTGGTTTTGGCACCAAactagcttgctaacgttagccatcTGGCTAGCATGCTGACCAAAACGTATGCAGAATGGATACACAACTAACGTTTCCGAGCTATCGTTAGCGATATTGCACGGGCCTGTAATTTTAGCTCGGTTTTTAGACGTATAGAAGTGACATGACATTACATTGTGGTCGCGGCATGAATTGTATACCTTCATTACTCTCAGAATGTGTTACAGATGGGAGTCAAGTCGGTGTCCTTGCCACTGAAAAAGACAACTGAAAGGACTGAAAATAGGAAGTCTACACTTACCTAGCTTTACTttctacgccatcttggat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1317557 True 395 lncRNA 0.44 1 23498823 23499217

Neighbor

gene id symbol gene type direction distance location
LOC110485985 LOC106585672 coding upstream 57578 23402396 ~ 23441245 (+)
LOC110485984 LOC106586345 coding upstream 107711 23367205 ~ 23391112 (+)
LOC110485983 LOC106585659 coding upstream 144901 23330234 ~ 23353922 (+)
LOC110485978 LOC106564882 coding upstream 173522 23080663 ~ 23325301 (+)
c13h17orf67 LOC106564992 coding upstream 888452 22606256 ~ 22610371 (+)
pitpnc1a LOC106585713 coding downstream 12489 23511706 ~ 23591433 (+)
LOC110485992 LOC106585723 coding downstream 96659 23595876 ~ 23608606 (+)
LOC110485993 LOC106585727 coding downstream 112608 23611825 ~ 23668173 (+)
LOC110485995 ima2 coding downstream 180537 23679754 ~ 23685732 (+)
LOC118938564 NA coding downstream 182303 23681520 ~ 23681645 (+)
G1155294 NA non-coding upstream 24381 23473667 ~ 23474442 (+)
G1155277 NA non-coding upstream 41170 23457203 ~ 23457653 (+)
G1155229 NA non-coding upstream 98761 23399485 ~ 23400062 (+)
G1155228 NA non-coding upstream 99671 23398942 ~ 23399152 (+)
G1155211 NA non-coding upstream 102161 23396564 ~ 23396662 (+)
G1155279 psd12 non-coding downstream 2856 23502073 ~ 23506480 (+)
G1155343 NA non-coding downstream 69858 23569075 ~ 23569392 (+)
G1155344 NA non-coding downstream 73388 23572605 ~ 23573275 (+)
G1155348 NA non-coding downstream 82470 23581687 ~ 23581893 (+)
G1155349 NA non-coding downstream 83099 23582316 ~ 23582539 (+)
G1155006 LOC100136012 other upstream 539472 22958932 ~ 22959351 (+)
G1154412 mcoln1 other upstream 987083 22511379 ~ 22511740 (+)
G1154335 NA other upstream 1042474 22439636 ~ 22456349 (+)
G1154234 NA other upstream 1339394 22158571 ~ 22159429 (+)
G1156089 NA other downstream 499429 23998646 ~ 24003968 (+)
G1156247 NA other downstream 827566 24326783 ~ 24328963 (+)
G1157117 NA other downstream 1264885 24764102 ~ 24764346 (+)

Expression


Co-expression Network