G1155343


Basic Information

Item Value
gene id G1155343
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 23569075 ~ 23569392 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1317601
TTCAATGTTCCTAGTTTCATTTTCAAGCTTCTTTTGTTACACGCCCACTCACCTTGAGAAGGAAACAAGGAAGGAAGAGAAACCACTCCAACTTTAGAAATGAGGATGGCTCCAATTAATCAGACATGatgcatctcttctcctctcttgcttttcatttctcctctctctctccatctctctccatctcttttcctcctctctccatctcttctcctctctccatctctctccatctccatctctctcc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1317601 True 250 lncRNA 0.44 2 23569075 23569392

Neighbor

gene id symbol gene type direction distance location
LOC110485985 LOC106585672 coding upstream 127830 23402396 ~ 23441245 (+)
LOC110485984 LOC106586345 coding upstream 177963 23367205 ~ 23391112 (+)
LOC110485983 LOC106585659 coding upstream 215153 23330234 ~ 23353922 (+)
LOC110485978 LOC106564882 coding upstream 243774 23080663 ~ 23325301 (+)
c13h17orf67 LOC106564992 coding upstream 958704 22606256 ~ 22610371 (+)
LOC110485992 LOC106585723 coding downstream 26484 23595876 ~ 23608606 (+)
LOC110485993 LOC106585727 coding downstream 42433 23611825 ~ 23668173 (+)
LOC110485995 ima2 coding downstream 110362 23679754 ~ 23685732 (+)
LOC118938564 NA coding downstream 112128 23681520 ~ 23681645 (+)
LOC118938638 NA coding downstream 114065 23683457 ~ 23683591 (+)
G1155279 psd12 non-coding upstream 62595 23502073 ~ 23506480 (+)
G1155309 NA non-coding upstream 69858 23498823 ~ 23499217 (+)
G1155294 NA non-coding upstream 94633 23473667 ~ 23474442 (+)
G1155277 NA non-coding upstream 111422 23457203 ~ 23457653 (+)
G1155229 NA non-coding upstream 169013 23399485 ~ 23400062 (+)
G1155344 NA non-coding downstream 3213 23572605 ~ 23573275 (+)
G1155348 NA non-coding downstream 12295 23581687 ~ 23581893 (+)
G1155349 NA non-coding downstream 12924 23582316 ~ 23582539 (+)
G1155351 NA non-coding downstream 14097 23583489 ~ 23583707 (+)
pitpnc1a LOC106585713 non-coding downstream 17658 23511706 ~ 23591433 (+)
G1155006 LOC100136012 other upstream 609724 22958932 ~ 22959351 (+)
G1154412 mcoln1 other upstream 1057335 22511379 ~ 22511740 (+)
G1154335 NA other upstream 1112726 22439636 ~ 22456349 (+)
G1154234 NA other upstream 1409646 22158571 ~ 22159429 (+)
G1156089 NA other downstream 429254 23998646 ~ 24003968 (+)
G1156247 NA other downstream 757391 24326783 ~ 24328963 (+)
G1157117 NA other downstream 1194710 24764102 ~ 24764346 (+)
G1157292 NA other downstream 1532148 25082584 ~ 25105138 (+)

Expression


Co-expression Network