G1155349


Basic Information

Item Value
gene id G1155349
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 23582316 ~ 23582539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1317607
atttttttcaacctgcatatttagttaaaagaaattcatgttagcaggcaatattaactagtgaaattgtgtcacttctcttgtgttcattgcacgtggagtcagggtatatgcaacagtttgggccgcctggctcgttgcgaactaatttgccagaattttaaataattatgacattgaaggttgtgcaatgtaacagcaatatttagacttagggttgccac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1317607 True 224 lncRNA 0.37 1 23582316 23582539

Neighbor

gene id symbol gene type direction distance location
LOC110485985 LOC106585672 coding upstream 141071 23402396 ~ 23441245 (+)
LOC110485984 LOC106586345 coding upstream 191204 23367205 ~ 23391112 (+)
LOC110485983 LOC106585659 coding upstream 228394 23330234 ~ 23353922 (+)
LOC110485978 LOC106564882 coding upstream 257015 23080663 ~ 23325301 (+)
c13h17orf67 LOC106564992 coding upstream 971945 22606256 ~ 22610371 (+)
LOC110485992 LOC106585723 coding downstream 13337 23595876 ~ 23608606 (+)
LOC110485993 LOC106585727 coding downstream 29286 23611825 ~ 23668173 (+)
LOC110485995 ima2 coding downstream 97215 23679754 ~ 23685732 (+)
LOC118938564 NA coding downstream 98981 23681520 ~ 23681645 (+)
LOC118938638 NA coding downstream 100918 23683457 ~ 23683591 (+)
G1155348 NA non-coding upstream 423 23581687 ~ 23581893 (+)
G1155344 NA non-coding upstream 9041 23572605 ~ 23573275 (+)
G1155343 NA non-coding upstream 12924 23569075 ~ 23569392 (+)
G1155279 psd12 non-coding upstream 75836 23502073 ~ 23506480 (+)
G1155309 NA non-coding upstream 83099 23498823 ~ 23499217 (+)
G1155351 NA non-coding downstream 950 23583489 ~ 23583707 (+)
pitpnc1a LOC106585713 non-coding downstream 4511 23511706 ~ 23591433 (+)
G1155901 NA non-coding downstream 9358 23591897 ~ 23592150 (+)
G1155958 NA non-coding downstream 127788 23710327 ~ 23711035 (+)
G1155006 LOC100136012 other upstream 622965 22958932 ~ 22959351 (+)
G1154412 mcoln1 other upstream 1070576 22511379 ~ 22511740 (+)
G1154335 NA other upstream 1125967 22439636 ~ 22456349 (+)
G1156089 NA other downstream 416107 23998646 ~ 24003968 (+)
G1156247 NA other downstream 744244 24326783 ~ 24328963 (+)
G1157117 NA other downstream 1181563 24764102 ~ 24764346 (+)
G1157292 NA other downstream 1519001 25082584 ~ 25105138 (+)

Expression


Co-expression Network