G1156460 (LOC106585723)


Basic Information

Item Value
gene id G1156460
gene name LOC106585723
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 23599507 ~ 23601690 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1318807
GCGCTGATTGGCTCTTCCGGCTCAGCTTACTCTTCCTGGTCTCCACTATTTTGGTGGGCCCCTGTGGCTGATCCCCATGGAGTAGGGTGTTCCAAGAGGGCACAGCCACCGACGATTTGGATACTGCGATCCCAGTGTGTCGTAGTTTCCCCAGGGCCGAGGCCAGAGACGACTTCTGACACTCGTAGGGAATGATGGAGAGGGCCTTGCCATGAGGGACAAACAGCTTTCCCAAATAACACCAGACCTGTCCATGGATTCTTCCCGCCATCTCCTTACCAGCCTGAAGAGTCTGGAAATTAGTATTCCAGATGCAGAGGAAAtCTTTGCCAGTTCTGGCGGAGGGATGGGGCACCCCCACCACAGCCACATGAGCTTCGTCCAGGGCTACTGCCGAGGCAGCTCCCAGCTCTCCCTCCCCCACGGGCAGCCTCAGGCGCAGGCTGCGAGGCAGGTCCTGCACCCCCTCCAGCCCCACATACCCCCGCGCCGCCACCACACTCTGGTACACACAGCCGTTAGGGTctggagagagtgagatagacgaCAGAGATGCAAGCCAGGTCAATCATAGCCTTATGTCATCAGCACATCACTGAGAGCGCAAGTTTCTCATTAAAAAACTAAATGCTATCATGAGGCTGTAGCTACGATGTCCGACAACTGCGTTTCATTGTTTGTTAAGTGCTTCATTGATATCAAATGCAGTACCATTTCAACAGTATGCTAATTatctgaggggggaaaaaacaccaTTAAAGCtgtaatatgtaactttttgggctacTCGATCAAACTCACATAGAAATgagagttatagatctgtcacgcctttgaaagcaagtctaagtgGTACATATGTTCTATTTCTATGCCTTcggttcttaagtttagtttccccgtcttttactttcggttttgcacaccagtttcaaacagctgaaaatacaagatttttggttattgaaaagatATTTCACTGCATTTGAGATGGTACGTTGATTCTCTACACAtcgcttgttttgtcacaaactgaaaataGGCTAACTATTAGAATGTTAACCAGGAAATGCCAGAACGATTTCTGCATAATGCACATTACTACTTGGACATTTCTAACACATTACTTTGGCAGGGAAGTGATGGCCGTACTCACACAGGTAGAGCAGGTTGAGGTGTTTGTCccggagagaggcagagaaactCAATGGGGAAGCTCCAGAGTCTTCTCTCTCCAGCCTATACTTCTGTAGGGTGTTGGGGTTGAGCCTCTGCACATAAAGGCAGCACTCCCC

Function

NR:

description
nucleolar protein 11-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1318807 True 1295 TUCP 0.49 5 23599507 23601690

Neighbor

gene id symbol gene type direction distance location
LOC110485989 LOC106585705 coding downstream 92998 23500002 ~ 23506509 (-)
LOC110485986 LOC106585679 coding downstream 100182 23442487 ~ 23499325 (-)
LOC110485981 NA coding downstream 349270 23238644 ~ 23250237 (-)
LOC118938242 NA coding downstream 365941 23228043 ~ 23233566 (-)
LOC110485982 LOC106567469 coding downstream 379251 23216183 ~ 23220256 (-)
trnas-aga-59 NA coding upstream 9022 23610712 ~ 23610793 (-)
LOC110485994 LOC106585744 coding upstream 69988 23671678 ~ 23677780 (-)
trnar-ccg-26 NA coding upstream 77775 23679465 ~ 23679537 (-)
LOC110485996 LOC106586353 coding upstream 97346 23699036 ~ 23707634 (-)
LOC110485997 LOC106585752 coding upstream 108837 23710527 ~ 23716337 (-)
G1155847 NA non-coding downstream 8155 23590747 ~ 23591352 (-)
G1155900 NA non-coding downstream 15488 23583604 ~ 23584019 (-)
G1155899 NA non-coding downstream 16400 23582837 ~ 23583107 (-)
G1155896 NA non-coding downstream 20614 23578673 ~ 23578893 (-)
G1155895 NA non-coding downstream 21338 23577755 ~ 23578169 (-)
G1156466 NA non-coding upstream 6111 23607801 ~ 23608589 (-)
G1156471 LOC106585727 non-coding upstream 10189 23611879 ~ 23612590 (-)
G1156547 NA non-coding upstream 104305 23705995 ~ 23706492 (-)
LOC110486002 LOC106585758 non-coding upstream 154010 23754159 ~ 23761800 (-)
G1156553 LOC106564867 non-coding upstream 168524 23770214 ~ 23772195 (-)
G1155782 LOC106585672 other downstream 195875 23402379 ~ 23403632 (-)
G1155674 NA other downstream 349275 23226214 ~ 23250232 (-)
si:ch211-214c7.4 LOC106588372 other downstream 1135832 22462260 ~ 22502075 (-)
LOC110485947 LOC106588570 other downstream 1526082 22069722 ~ 22073496 (-)
LOC110486013 LOC106585880 other upstream 485014 24086694 ~ 24134220 (-)
G1156864 NA other upstream 697229 24298919 ~ 24300232 (-)
G1157012 NA other upstream 964949 24566639 ~ 24566962 (-)
G1157522 ifm3 other upstream 1469796 25071149 ~ 25103009 (-)

Expression


Co-expression Network