G1156004


Basic Information

Item Value
gene id G1156004
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 23774209 ~ 23774491 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1318308
AACTGGGAGCTCTTTAAATTTGTGGCCAAATAGTGGCCAAATACCTTAGAAAATATGGTAGTAATCTTGCTAAAACCAAaagagctgaggaaacttcctttctcagaggtccccagccagcctctcaggggaggagagatggaactGATTGAGTTAcgaaataaactggataatatacagtacatagattcaataaactggataatatacagtacatagattcaataaactggataatatagAGTACATAGATtcaataaac

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1318308 True 262 lncRNA 0.36 2 23774209 23774491

Neighbor

gene id symbol gene type direction distance location
LOC110485999 tcpd coding upstream 1212 23761786 ~ 23772997 (+)
LOC110486000 LOC106585772 coding upstream 19652 23728681 ~ 23754557 (+)
LOC110485995 ima2 coding upstream 88477 23679754 ~ 23685732 (+)
LOC118938639 NA coding upstream 89234 23684841 ~ 23684975 (+)
LOC118938638 NA coding upstream 90618 23683457 ~ 23683591 (+)
fam161a LOC106564865 coding downstream 8571 23783062 ~ 23789617 (+)
LOC110485112 LOC100380723 coding downstream 17162 23791653 ~ 23807108 (+)
LOC118938619 NA coding downstream 25618 23800109 ~ 23800239 (+)
LOC118938607 NA coding downstream 29769 23804260 ~ 23804396 (+)
LOC118938610 NA coding downstream 31295 23805786 ~ 23805910 (+)
G1155958 NA non-coding upstream 63174 23710327 ~ 23711035 (+)
LOC110485993 LOC106585727 non-coding upstream 106044 23611825 ~ 23668173 (+)
G1155901 NA non-coding upstream 182059 23591897 ~ 23592150 (+)
pitpnc1a LOC106585713 non-coding upstream 182776 23511706 ~ 23591433 (+)
G1155351 NA non-coding upstream 190502 23583489 ~ 23583707 (+)
G1156000 NA non-coding downstream 122 23774613 ~ 23775018 (+)
G1156025 NA non-coding downstream 93579 23868070 ~ 23868285 (+)
G1156046 NA non-coding downstream 144980 23919471 ~ 23919674 (+)
G1156065 NA non-coding downstream 181759 23956250 ~ 23956539 (+)
G1156079 NA non-coding downstream 202543 23977034 ~ 23979017 (+)
LOC110485992 LOC106585723 other upstream 175206 23595876 ~ 23608606 (+)
G1155006 LOC100136012 other upstream 814858 22958932 ~ 22959351 (+)
c13h17orf67 LOC106564992 other upstream 1163930 22606256 ~ 22610371 (+)
G1154412 mcoln1 other upstream 1262469 22511379 ~ 22511740 (+)
G1156089 NA other downstream 224155 23998646 ~ 24003968 (+)
G1156247 NA other downstream 552292 24326783 ~ 24328963 (+)
G1157117 NA other downstream 989611 24764102 ~ 24764346 (+)
G1157292 NA other downstream 1327049 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 1638618 25410869 ~ 25419361 (+)

Expression


Co-expression Network