Gene
RNA
| Item | Value |
|---|---|
| gene id | G1156046 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 23919471 ~ 23919674 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1318350 | True | 204 | lncRNA | 0.53 | 1 | 23919471 | 23919674 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486007 | LOC106585823 | coding | upstream | 7268 | 23894045 ~ 23912203 (+) |
| LOC110486005 | comd1 | coding | upstream | 28944 | 23878481 ~ 23890527 (+) |
| LOC110486004 | LOC106585779 | coding | upstream | 53776 | 23807835 ~ 23865695 (+) |
| LOC118938611 | NA | coding | upstream | 57883 | 23861456 ~ 23861588 (+) |
| LOC118938574 | NA | coding | upstream | 87954 | 23831384 ~ 23831517 (+) |
| LOC110486008 | LOC106564858 | coding | downstream | 65085 | 23984759 ~ 23990432 (+) |
| LOC110486012 | LOC106585868 | coding | downstream | 115538 | 24035212 ~ 24046678 (+) |
| LOC110486011 | LOC106585850 | coding | downstream | 129955 | 24049629 ~ 24066383 (+) |
| LOC110486014 | LOC106585894 | coding | downstream | 225538 | 24145212 ~ 24158953 (+) |
| actr2a | LOC106585927 | coding | downstream | 270379 | 24190053 ~ 24210340 (+) |
| G1156025 | NA | non-coding | upstream | 51186 | 23868070 ~ 23868285 (+) |
| G1156000 | NA | non-coding | upstream | 144453 | 23774613 ~ 23775018 (+) |
| G1156004 | NA | non-coding | upstream | 144980 | 23774209 ~ 23774491 (+) |
| G1155958 | NA | non-coding | upstream | 208436 | 23710327 ~ 23711035 (+) |
| LOC110485993 | LOC106585727 | non-coding | upstream | 251306 | 23611825 ~ 23668173 (+) |
| G1156065 | NA | non-coding | downstream | 36576 | 23956250 ~ 23956539 (+) |
| G1156079 | NA | non-coding | downstream | 57360 | 23977034 ~ 23979017 (+) |
| G1156096 | NA | non-coding | downstream | 96951 | 24016625 ~ 24017093 (+) |
| G1156104 | NA | non-coding | downstream | 107001 | 24026675 ~ 24026898 (+) |
| G1156107 | NA | non-coding | downstream | 111239 | 24030913 ~ 24031133 (+) |
| LOC110485992 | LOC106585723 | other | upstream | 320468 | 23595876 ~ 23608606 (+) |
| pitpnc1a | LOC106585713 | other | upstream | 347691 | 23511706 ~ 23591433 (+) |
| G1155006 | LOC100136012 | other | upstream | 960120 | 22958932 ~ 22959351 (+) |
| c13h17orf67 | LOC106564992 | other | upstream | 1309192 | 22606256 ~ 22610371 (+) |
| G1154412 | mcoln1 | other | upstream | 1407731 | 22511379 ~ 22511740 (+) |
| G1156089 | NA | other | downstream | 78972 | 23998646 ~ 24003968 (+) |
| G1156247 | NA | other | downstream | 407109 | 24326783 ~ 24328963 (+) |
| G1157117 | NA | other | downstream | 844428 | 24764102 ~ 24764346 (+) |
| G1157292 | NA | other | downstream | 1181866 | 25082584 ~ 25105138 (+) |
| LOC110486053 | polr3f | other | downstream | 1493435 | 25410869 ~ 25419361 (+) |
