G1156247


Basic Information

Item Value
gene id G1156247
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 24326783 ~ 24328963 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1318573
acacacagatcccttTCCTCCGATAGTGGACACATTTAGCACAaacctaaaaaaaacaaaaacaaaaggagGGACCACTAATACTACCATGTTAATAACAAATACATCTGTAAAGAAAAGAATatatacaacaaaaaaaacatctcGAATGGTTTCCCCCTGAAACAGAGCTGGTAGGCTACTCTGGGGCATAAGTGAAGCTTTGCTGGAATAGAAGTGACAGAGATATCCAAAAGATTATAGTTGTTTAGAATAACAGTTACATGGAGTGGAGTTACTTTTGAGTCATTTCCATATTTATTCAACATTCaccaattctttttttttggcAACATCCATATACATGTCATTTTCATTTGTTATAATATATTAACATTAAGATTCATATGTAAACATAGAGATTTTCAAAAAAATGGATCTACATGCACAAAGGAAAaaaaaggggggaggggagagagagaaccctcCATGTCATGCAAGCACATCACAAGACTTCGGGGGCTTTTTAAGATCAGATAAGAGCCATCGTCGTGCGGCACGCCATTGAAGACAAAACAGCGGTGCGAGCCGGGCGCATGCGGCACAGGATCACGCACGTGAACACCCGCCCGTCGGTGCATTCAGTTGAGCAAAAAAGCAGAGCCACAAACTTAAAACACATTTAAATTCCATAAAATGTATAGACACAAATAAAAACCTGCTCTGtcttgtcccctctctctgtgtaaagAACGTTGGTAGCTTTATAATAAAATGCCCTTTTGTCGGTTGCATCTtctcaagaaaaaaaaaagaagaagaatgttcaggaggtagggaggaagagggacagcCCACCTGTGACCTTGCACTATTACCTCAACTCATGGCAAGAGTCCATACAATGTTTGAGAAACCGAATTAAAAGATGTTCATGAAATAGATGCAAATTACATGGCCAAGAAGGCTAAATGTGTACGTTGAAATCAACGCCTCTCATAAGCCGAACCAACTTAACATCCCTCAATGTCCTAACTGTAGCCTACTTACTGTAAGTTACCTCAGCTCTGCCTGCAGTTAAGTTGTTaaatgcaacccCTGACGAAagcaataaatacaaaaacacattAACGAGAATATTCTAAATGGCCTGTGATGTCCTACCATGCAGAATGAAGACGTGCTTTTTGTTGGAATAAGAGACTTAAGGTGAAAATTATTCGCATAACCAACCAGTGACTCAAAAAAAAAAGACCTTGTCCTTGAAGTAAAACCGTAAGCTTGAATGTGCAGAAATGTAAATATTATTCTCTCTACTCCACTGCATCTTCAAAGCAAGATGATCGATGTCCCTGACAATATAAATATGTATAGTGCACAATCCCCCTTATTAAAAAAAAAGAGGCCGTCTCACATGATCTTAAAAACGTAGCTGTTCAAAATATTGGGAGTGAAAGAAGCAGGGAAAGGACTGTTTGAATCGTGCAGTATGCACATTGAAATAAGCAAATTCTACCGAATGTTGATAGAAAAAGATGTATACCATTATATTCAACCGGTTTATTATATGTTCTGGATGGCACTTCATGCTCTATTTTTGTGTTGTGTTGAAATCAAGTACATCAAGTTACATCACAGCTAACTACACacatcccccacccccccccaaaaaagccaagaccaaaataaatatgaaaaaaaaaaatcccaactGCCTCAAAATCAAAGAGAAACACACTAAcccttcctccaccaaactgaaACACTCACTCAACGATAAAAAGCTGTCCTTCAGGCTTTTAAAGTGCTACACCGGGTTATTGAGAGAACTCATGTTCGATAACACTATAAAATGGTTGGCGTCAGAAGGCTCGGGTTGGAAAAAAAGAAGAAGTGGCTTCACAGAGAAAAATACTTCCATTGAAAAATACACAGAGACCTTTGCTGGATGACACCTTGAGCAGATCCTCAGAAATGGAGAAGAAAGCGAAAAGGGATTTTTTGCAGGGGGCCCGTGAGGTCAGTCACACGTCCACAACCATCTTTTTGTGTATGTCTAATCCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1318573 True 2045 TUCP 0.39 3 24326783 24328963

Neighbor

gene id symbol gene type direction distance location
LOC110486021 LOC106585998 coding upstream 5546 24317048 ~ 24321237 (+)
LOC110486019 LOC106585964 coding upstream 26537 24261947 ~ 24300246 (+)
actr2a LOC106585927 coding upstream 116443 24190053 ~ 24210340 (+)
LOC110486014 LOC106585894 coding upstream 167830 24145212 ~ 24158953 (+)
LOC110486011 LOC106585850 coding upstream 260400 24049629 ~ 24066383 (+)
LOC118938548 NA coding downstream 42661 24371624 ~ 24373364 (+)
LOC110486025 LOC106586048 coding downstream 84557 24413520 ~ 24441284 (+)
esf1 LOC106564836 coding downstream 135369 24464332 ~ 24476087 (+)
LOC110486030 LOC106586106 coding downstream 155641 24484604 ~ 24522503 (+)
LOC110486033 LOC106564832 coding downstream 225982 24554945 ~ 24624188 (+)
G1156276 NA non-coding upstream 12414 24314159 ~ 24314369 (+)
G1156273 NA non-coding upstream 17129 24309448 ~ 24309654 (+)
G1156177 spred2 non-coding upstream 97545 24224783 ~ 24229238 (+)
G1156222 NA non-coding upstream 104440 24222057 ~ 24222343 (+)
G1156286 NA non-coding downstream 25211 24354174 ~ 24354853 (+)
G1156292 NA non-coding downstream 38566 24367529 ~ 24367754 (+)
G1156294 NA non-coding downstream 41311 24370274 ~ 24370496 (+)
G1156296 NA non-coding downstream 45826 24374789 ~ 24375132 (+)
G1156299 NA non-coding downstream 49521 24378484 ~ 24378713 (+)
G1156089 NA other upstream 322815 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 727780 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 755003 23511706 ~ 23591433 (+)
G1155006 LOC100136012 other upstream 1367432 22958932 ~ 22959351 (+)
c13h17orf67 LOC106564992 other upstream 1716504 22606256 ~ 22610371 (+)
G1157117 NA other downstream 435139 24764102 ~ 24764346 (+)
G1157292 NA other downstream 772577 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 1084146 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 1133964 25462927 ~ 25463458 (+)
G1157972 NA other downstream 1144159 25473122 ~ 25473978 (+)

Expression


Co-expression Network