G1156292


Basic Information

Item Value
gene id G1156292
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 24367529 ~ 24367754 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1318618
ggcatgctcctgatgaggtggcggatggtctcctgagggatctcctcccagacctggactaaagcatccgccaactcctggacagtctgtgatgcaacgtggcgttggtggatggagcgagacatgatgtcccagatgtgctcaattggattcaggtctggggaacgggcgggccagtccatagcatcaatgccttcctcttgcaggaactgctgacacactccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1318618 True 226 lncRNA 0.57 1 24367529 24367754

Neighbor

gene id symbol gene type direction distance location
LOC110486021 LOC106585998 coding upstream 46292 24317048 ~ 24321237 (+)
LOC110486019 LOC106585964 coding upstream 67283 24261947 ~ 24300246 (+)
actr2a LOC106585927 coding upstream 157189 24190053 ~ 24210340 (+)
LOC110486014 LOC106585894 coding upstream 208576 24145212 ~ 24158953 (+)
LOC110486011 LOC106585850 coding upstream 301146 24049629 ~ 24066383 (+)
LOC118938548 NA coding downstream 3870 24371624 ~ 24373364 (+)
LOC110486025 LOC106586048 coding downstream 45766 24413520 ~ 24441284 (+)
esf1 LOC106564836 coding downstream 96578 24464332 ~ 24476087 (+)
LOC110486030 LOC106586106 coding downstream 116850 24484604 ~ 24522503 (+)
LOC110486033 LOC106564832 coding downstream 187191 24554945 ~ 24624188 (+)
G1156286 NA non-coding upstream 12676 24354174 ~ 24354853 (+)
G1156276 NA non-coding upstream 53160 24314159 ~ 24314369 (+)
G1156273 NA non-coding upstream 57875 24309448 ~ 24309654 (+)
G1156177 spred2 non-coding upstream 138291 24224783 ~ 24229238 (+)
G1156294 NA non-coding downstream 2520 24370274 ~ 24370496 (+)
G1156296 NA non-coding downstream 7035 24374789 ~ 24375132 (+)
G1156299 NA non-coding downstream 10730 24378484 ~ 24378713 (+)
G1156301 NA non-coding downstream 12319 24380073 ~ 24380282 (+)
G1156314 NA non-coding downstream 32728 24400482 ~ 24400781 (+)
G1156247 NA other upstream 38566 24326783 ~ 24328963 (+)
G1156089 NA other upstream 363561 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 768526 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 795749 23511706 ~ 23591433 (+)
G1155006 LOC100136012 other upstream 1408178 22958932 ~ 22959351 (+)
G1157117 NA other downstream 396348 24764102 ~ 24764346 (+)
G1157292 NA other downstream 733786 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 1045355 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 1095173 25462927 ~ 25463458 (+)
G1157972 NA other downstream 1105368 25473122 ~ 25473978 (+)

Expression


Co-expression Network