G1156296


Basic Information

Item Value
gene id G1156296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 24374789 ~ 24375132 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1318623
ATTTCACAACTCAACTGAGGGACGTTACAGATGATTATATGTGTGAGACGggctagtcattcaaaaatcatgctaACCACTATTGcagacagtgagtccatgcaacttatgtgatttgctaagcaaatgtttactcctgaacttatttacgCTTGTCAtcacaaaggggttgaatacttattgcctCAAGCCATTCCAgccatttttgttttcatttgtAAAACATTCTTAAAAACCCACTTtgacattctggggtattgtgtgtagatcagtgacacaaaatgtagttctttaatccattttaaattcacgctgtaacacaacaaaatgtgggagaagtccaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1318623 True 344 lncRNA 0.37 1 24374789 24375132

Neighbor

gene id symbol gene type direction distance location
LOC118938548 NA coding upstream 1425 24371624 ~ 24373364 (+)
LOC110486021 LOC106585998 coding upstream 53552 24317048 ~ 24321237 (+)
LOC110486019 LOC106585964 coding upstream 74543 24261947 ~ 24300246 (+)
actr2a LOC106585927 coding upstream 164449 24190053 ~ 24210340 (+)
LOC110486014 LOC106585894 coding upstream 215836 24145212 ~ 24158953 (+)
LOC110486025 LOC106586048 coding downstream 38388 24413520 ~ 24441284 (+)
esf1 LOC106564836 coding downstream 89200 24464332 ~ 24476087 (+)
LOC110486030 LOC106586106 coding downstream 109472 24484604 ~ 24522503 (+)
LOC110486033 LOC106564832 coding downstream 179813 24554945 ~ 24624188 (+)
LOC110486034 LOC106586144 coding downstream 332015 24707147 ~ 24719985 (+)
G1156294 NA non-coding upstream 4293 24370274 ~ 24370496 (+)
G1156292 NA non-coding upstream 7035 24367529 ~ 24367754 (+)
G1156286 NA non-coding upstream 19936 24354174 ~ 24354853 (+)
G1156276 NA non-coding upstream 60420 24314159 ~ 24314369 (+)
G1156273 NA non-coding upstream 65135 24309448 ~ 24309654 (+)
G1156299 NA non-coding downstream 3352 24378484 ~ 24378713 (+)
G1156301 NA non-coding downstream 4941 24380073 ~ 24380282 (+)
G1156314 NA non-coding downstream 25350 24400482 ~ 24400781 (+)
G1156334 NA non-coding downstream 26442 24401574 ~ 24402362 (+)
G1156339 NA non-coding downstream 44586 24419718 ~ 24492040 (+)
G1156247 NA other upstream 45826 24326783 ~ 24328963 (+)
G1156089 NA other upstream 370821 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 775786 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 803009 23511706 ~ 23591433 (+)
G1155006 LOC100136012 other upstream 1415438 22958932 ~ 22959351 (+)
G1157117 NA other downstream 388970 24764102 ~ 24764346 (+)
G1157292 NA other downstream 726408 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 1037977 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 1087795 25462927 ~ 25463458 (+)
G1157972 NA other downstream 1097990 25473122 ~ 25473978 (+)

Expression


Co-expression Network