Gene
RNA
| Item | Value |
|---|---|
| gene id | G1156299 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 24378484 ~ 24378713 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1318626 | True | 230 | lncRNA | 0.40 | 1 | 24378484 | 24378713 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938548 | NA | coding | upstream | 5120 | 24371624 ~ 24373364 (+) |
| LOC110486021 | LOC106585998 | coding | upstream | 57247 | 24317048 ~ 24321237 (+) |
| LOC110486019 | LOC106585964 | coding | upstream | 78238 | 24261947 ~ 24300246 (+) |
| actr2a | LOC106585927 | coding | upstream | 168144 | 24190053 ~ 24210340 (+) |
| LOC110486014 | LOC106585894 | coding | upstream | 219531 | 24145212 ~ 24158953 (+) |
| LOC110486025 | LOC106586048 | coding | downstream | 34807 | 24413520 ~ 24441284 (+) |
| esf1 | LOC106564836 | coding | downstream | 85619 | 24464332 ~ 24476087 (+) |
| LOC110486030 | LOC106586106 | coding | downstream | 105891 | 24484604 ~ 24522503 (+) |
| LOC110486033 | LOC106564832 | coding | downstream | 176232 | 24554945 ~ 24624188 (+) |
| LOC110486034 | LOC106586144 | coding | downstream | 328434 | 24707147 ~ 24719985 (+) |
| G1156296 | NA | non-coding | upstream | 3352 | 24374789 ~ 24375132 (+) |
| G1156294 | NA | non-coding | upstream | 7988 | 24370274 ~ 24370496 (+) |
| G1156292 | NA | non-coding | upstream | 10730 | 24367529 ~ 24367754 (+) |
| G1156286 | NA | non-coding | upstream | 23631 | 24354174 ~ 24354853 (+) |
| G1156276 | NA | non-coding | upstream | 64115 | 24314159 ~ 24314369 (+) |
| G1156301 | NA | non-coding | downstream | 1360 | 24380073 ~ 24380282 (+) |
| G1156314 | NA | non-coding | downstream | 21769 | 24400482 ~ 24400781 (+) |
| G1156334 | NA | non-coding | downstream | 22861 | 24401574 ~ 24402362 (+) |
| G1156339 | NA | non-coding | downstream | 41005 | 24419718 ~ 24492040 (+) |
| G1156377 | NA | non-coding | downstream | 164882 | 24543595 ~ 24544417 (+) |
| G1156247 | NA | other | upstream | 49521 | 24326783 ~ 24328963 (+) |
| G1156089 | NA | other | upstream | 374516 | 23998646 ~ 24003968 (+) |
| LOC110485992 | LOC106585723 | other | upstream | 779481 | 23595876 ~ 23608606 (+) |
| pitpnc1a | LOC106585713 | other | upstream | 806704 | 23511706 ~ 23591433 (+) |
| G1155006 | LOC100136012 | other | upstream | 1419133 | 22958932 ~ 22959351 (+) |
| G1157117 | NA | other | downstream | 385389 | 24764102 ~ 24764346 (+) |
| G1157292 | NA | other | downstream | 722827 | 25082584 ~ 25105138 (+) |
| LOC110486053 | polr3f | other | downstream | 1034396 | 25410869 ~ 25419361 (+) |
| G1157952 | LOC106584892 | other | downstream | 1084214 | 25462927 ~ 25463458 (+) |
| G1157972 | NA | other | downstream | 1094409 | 25473122 ~ 25473978 (+) |
