G1156426


Basic Information

Item Value
gene id G1156426
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 24682855 ~ 24683067 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1318766
GGATtgtttgagaccagccacctggacagctgatgaaattgtgggtttgcacaaccaaagaatttctgcacaaactgtcagaaaccgtctcagggaagttaatctgcatgctcgtcgtcctcgccagggtcttgacctgactgcagtttgatgctgtaaccaacttcagtgggcaaatgctcaccttcgatggccactggcatgttgtagaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1318766 True 213 lncRNA 0.49 1 24682855 24683067

Neighbor

gene id symbol gene type direction distance location
LOC110486033 LOC106564832 coding upstream 58667 24554945 ~ 24624188 (+)
LOC110486030 LOC106586106 coding upstream 160352 24484604 ~ 24522503 (+)
esf1 LOC106564836 coding upstream 206768 24464332 ~ 24476087 (+)
LOC110486025 LOC106586048 coding upstream 241571 24413520 ~ 24441284 (+)
LOC118938548 NA coding upstream 309491 24371624 ~ 24373364 (+)
LOC110486034 LOC106586144 coding downstream 24080 24707147 ~ 24719985 (+)
LOC110486038 LOC106586164 coding downstream 220984 24904051 ~ 24996436 (+)
LOC110486039 LOC106586175 coding downstream 364774 25047841 ~ 25065592 (+)
iip iip coding downstream 388485 25071552 ~ 25072676 (+)
LOC110486040 ifm3 coding downstream 407498 25090565 ~ 25091740 (+)
G1156424 NA non-coding upstream 1928 24680579 ~ 24680927 (+)
G1156384 NA non-coding upstream 13371 24663127 ~ 24669484 (+)
G1156386 LOC100135918 non-coding upstream 23941 24655075 ~ 24658914 (+)
G1156385 LOC100135918 non-coding upstream 27824 24626106 ~ 24655031 (+)
G1156377 NA non-coding upstream 138438 24543595 ~ 24544417 (+)
G1156429 NA non-coding downstream 2089 24685156 ~ 24685477 (+)
G1156431 LOC106581707 non-coding downstream 6769 24689836 ~ 24690070 (+)
G1156436 NA non-coding downstream 14498 24697565 ~ 24698486 (+)
G1156437 NA non-coding downstream 15526 24698593 ~ 24699403 (+)
G1156438 NA non-coding downstream 16501 24699568 ~ 24699949 (+)
G1156247 NA other upstream 353892 24326783 ~ 24328963 (+)
G1156089 NA other upstream 678887 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 1083852 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 1111075 23511706 ~ 23591433 (+)
G1155006 LOC100136012 other upstream 1723504 22958932 ~ 22959351 (+)
G1157117 NA other downstream 81035 24764102 ~ 24764346 (+)
G1157292 NA other downstream 418473 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 730042 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 779860 25462927 ~ 25463458 (+)
G1157972 NA other downstream 790055 25473122 ~ 25473978 (+)

Expression


Co-expression Network