Gene
RNA
| Item | Value |
|---|---|
| gene id | G1156436 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 24697565 ~ 24698486 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tubulin-specific chaperone E-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1318783 | True | 814 | lncRNA | 0.45 | 2 | 24697565 | 24698486 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486033 | LOC106564832 | coding | upstream | 73377 | 24554945 ~ 24624188 (+) |
| LOC110486030 | LOC106586106 | coding | upstream | 175062 | 24484604 ~ 24522503 (+) |
| esf1 | LOC106564836 | coding | upstream | 221478 | 24464332 ~ 24476087 (+) |
| LOC110486025 | LOC106586048 | coding | upstream | 256281 | 24413520 ~ 24441284 (+) |
| LOC118938548 | NA | coding | upstream | 324201 | 24371624 ~ 24373364 (+) |
| LOC110486034 | LOC106586144 | coding | downstream | 8661 | 24707147 ~ 24719985 (+) |
| LOC110486038 | LOC106586164 | coding | downstream | 205565 | 24904051 ~ 24996436 (+) |
| LOC110486039 | LOC106586175 | coding | downstream | 349355 | 25047841 ~ 25065592 (+) |
| iip | iip | coding | downstream | 373066 | 25071552 ~ 25072676 (+) |
| LOC110486040 | ifm3 | coding | downstream | 392079 | 25090565 ~ 25091740 (+) |
| G1156431 | LOC106581707 | non-coding | upstream | 7495 | 24689836 ~ 24690070 (+) |
| G1156429 | NA | non-coding | upstream | 12088 | 24685156 ~ 24685477 (+) |
| G1156426 | NA | non-coding | upstream | 14498 | 24682855 ~ 24683067 (+) |
| G1156424 | NA | non-coding | upstream | 16638 | 24680579 ~ 24680927 (+) |
| G1156384 | NA | non-coding | upstream | 28081 | 24663127 ~ 24669484 (+) |
| G1156437 | NA | non-coding | downstream | 107 | 24698593 ~ 24699403 (+) |
| G1156438 | NA | non-coding | downstream | 1082 | 24699568 ~ 24699949 (+) |
| G1156439 | NA | non-coding | downstream | 5105 | 24703591 ~ 24704109 (+) |
| G1156442 | NA | non-coding | downstream | 14546 | 24713032 ~ 24713282 (+) |
| G1156443 | NA | non-coding | downstream | 14878 | 24713364 ~ 24713681 (+) |
| G1156247 | NA | other | upstream | 368602 | 24326783 ~ 24328963 (+) |
| G1156089 | NA | other | upstream | 693597 | 23998646 ~ 24003968 (+) |
| LOC110485992 | LOC106585723 | other | upstream | 1098562 | 23595876 ~ 23608606 (+) |
| pitpnc1a | LOC106585713 | other | upstream | 1125785 | 23511706 ~ 23591433 (+) |
| G1155006 | LOC100136012 | other | upstream | 1738214 | 22958932 ~ 22959351 (+) |
| G1157117 | NA | other | downstream | 65616 | 24764102 ~ 24764346 (+) |
| G1157292 | NA | other | downstream | 403054 | 25082584 ~ 25105138 (+) |
| LOC110486053 | polr3f | other | downstream | 714623 | 25410869 ~ 25419361 (+) |
| G1157952 | LOC106584892 | other | downstream | 764441 | 25462927 ~ 25463458 (+) |
| G1157972 | NA | other | downstream | 774636 | 25473122 ~ 25473978 (+) |
