G1156438


Basic Information

Item Value
gene id G1156438
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 24699568 ~ 24699949 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1318785
ataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctatgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1318785 True 382 lncRNA 0.38 1 24699568 24699949

Neighbor

gene id symbol gene type direction distance location
LOC110486033 LOC106564832 coding upstream 75380 24554945 ~ 24624188 (+)
LOC110486030 LOC106586106 coding upstream 177065 24484604 ~ 24522503 (+)
esf1 LOC106564836 coding upstream 223481 24464332 ~ 24476087 (+)
LOC110486025 LOC106586048 coding upstream 258284 24413520 ~ 24441284 (+)
LOC118938548 NA coding upstream 326204 24371624 ~ 24373364 (+)
LOC110486034 LOC106586144 coding downstream 7198 24707147 ~ 24719985 (+)
LOC110486038 LOC106586164 coding downstream 204102 24904051 ~ 24996436 (+)
LOC110486039 LOC106586175 coding downstream 347892 25047841 ~ 25065592 (+)
iip iip coding downstream 371603 25071552 ~ 25072676 (+)
LOC110486040 ifm3 coding downstream 390616 25090565 ~ 25091740 (+)
G1156437 NA non-coding upstream 165 24698593 ~ 24699403 (+)
G1156436 NA non-coding upstream 1082 24697565 ~ 24698486 (+)
G1156431 LOC106581707 non-coding upstream 9498 24689836 ~ 24690070 (+)
G1156429 NA non-coding upstream 14091 24685156 ~ 24685477 (+)
G1156426 NA non-coding upstream 16501 24682855 ~ 24683067 (+)
G1156439 NA non-coding downstream 3642 24703591 ~ 24704109 (+)
G1156442 NA non-coding downstream 13083 24713032 ~ 24713282 (+)
G1156443 NA non-coding downstream 13415 24713364 ~ 24713681 (+)
G1156446 NA non-coding downstream 27914 24727863 ~ 24728065 (+)
G1156247 NA other upstream 370605 24326783 ~ 24328963 (+)
G1156089 NA other upstream 695600 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 1100565 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 1127788 23511706 ~ 23591433 (+)
G1155006 LOC100136012 other upstream 1740217 22958932 ~ 22959351 (+)
G1157117 NA other downstream 64153 24764102 ~ 24764346 (+)
G1157292 NA other downstream 401591 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 713160 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 762978 25462927 ~ 25463458 (+)
G1157972 NA other downstream 773173 25473122 ~ 25473978 (+)

Expression


Co-expression Network