G1156443


Basic Information

Item Value
gene id G1156443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 24713364 ~ 24713681 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1318790
GGTCCGTggagcgacgcacaattggcctagcgttgtccgggttagggagggtttggccggtagggatatccttgtctcatcgcgcaccagcgactcctgtggcgggccgggcgcagtgcacgctaaccaaggttgccaggtgcacagtgtttcctccgacacattggtgcggctggcttccgggttggatgcgcgctgtgttaagaagcagtgcggcttggttgggttgtgtatcggaggacgtaagactttcgaccttcgtctctcccgagcccgtacgggagttgtagcgatgagacaagatagtagctactaaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1318790 True 318 lncRNA 0.59 1 24713364 24713681

Neighbor

gene id symbol gene type direction distance location
LOC110486033 LOC106564832 coding upstream 89176 24554945 ~ 24624188 (+)
LOC110486030 LOC106586106 coding upstream 190861 24484604 ~ 24522503 (+)
esf1 LOC106564836 coding upstream 237277 24464332 ~ 24476087 (+)
LOC110486025 LOC106586048 coding upstream 272080 24413520 ~ 24441284 (+)
LOC118938548 NA coding upstream 340000 24371624 ~ 24373364 (+)
LOC110486038 LOC106586164 coding downstream 190370 24904051 ~ 24996436 (+)
LOC110486039 LOC106586175 coding downstream 334160 25047841 ~ 25065592 (+)
iip iip coding downstream 357871 25071552 ~ 25072676 (+)
LOC110486040 ifm3 coding downstream 376884 25090565 ~ 25091740 (+)
LOC118938245 NA coding downstream 379864 25093545 ~ 25104730 (+)
G1156442 NA non-coding upstream 82 24713032 ~ 24713282 (+)
G1156439 NA non-coding upstream 9255 24703591 ~ 24704109 (+)
G1156438 NA non-coding upstream 13415 24699568 ~ 24699949 (+)
G1156437 NA non-coding upstream 13961 24698593 ~ 24699403 (+)
G1156436 NA non-coding upstream 14878 24697565 ~ 24698486 (+)
LOC110486034 LOC106586144 non-coding downstream 4851 24707147 ~ 24719985 (+)
G1156446 NA non-coding downstream 14182 24727863 ~ 24728065 (+)
G1156448 NA non-coding downstream 16882 24730563 ~ 24730780 (+)
G1156453 NA non-coding downstream 20240 24733921 ~ 24734132 (+)
G1157104 NA non-coding downstream 33863 24747544 ~ 24747781 (+)
G1156247 NA other upstream 384401 24326783 ~ 24328963 (+)
G1156089 NA other upstream 709396 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 1114361 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 1141584 23511706 ~ 23591433 (+)
G1155006 LOC100136012 other upstream 1754013 22958932 ~ 22959351 (+)
G1157117 NA other downstream 50421 24764102 ~ 24764346 (+)
G1157292 NA other downstream 387859 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 699428 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 749246 25462927 ~ 25463458 (+)
G1157972 NA other downstream 759441 25473122 ~ 25473978 (+)

Expression


Co-expression Network