G1156446


Basic Information

Item Value
gene id G1156446
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 24727863 ~ 24728065 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1318793
CACTGTGTACCTTTATTGACTGTGCACATAGCACTATTAAATTAATTAAGCATGCTCCATAAAGGCTAGGTAATTAGCATGCTTGGGCTCCTAATCCAATCAGTGTCCATGATGCTGCACGGTGAGCTCATCGCTATATGACATTCACACCCATGCTGACTCTGCACATTTACTGTAAAACCTGGCACGGCGACCTGCGTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1318793 True 203 lncRNA 0.45 1 24727863 24728065

Neighbor

gene id symbol gene type direction distance location
LOC110486034 LOC106586144 coding upstream 9326 24707147 ~ 24719985 (+)
LOC110486033 LOC106564832 coding upstream 103675 24554945 ~ 24624188 (+)
LOC110486030 LOC106586106 coding upstream 205360 24484604 ~ 24522503 (+)
esf1 LOC106564836 coding upstream 251776 24464332 ~ 24476087 (+)
LOC110486025 LOC106586048 coding upstream 286579 24413520 ~ 24441284 (+)
LOC110486038 LOC106586164 coding downstream 175986 24904051 ~ 24996436 (+)
LOC110486039 LOC106586175 coding downstream 319776 25047841 ~ 25065592 (+)
iip iip coding downstream 343487 25071552 ~ 25072676 (+)
LOC110486040 ifm3 coding downstream 362500 25090565 ~ 25091740 (+)
LOC118938245 NA coding downstream 365480 25093545 ~ 25104730 (+)
G1156443 NA non-coding upstream 14182 24713364 ~ 24713681 (+)
G1156442 NA non-coding upstream 14581 24713032 ~ 24713282 (+)
G1156439 NA non-coding upstream 23754 24703591 ~ 24704109 (+)
G1156438 NA non-coding upstream 27914 24699568 ~ 24699949 (+)
G1156448 NA non-coding downstream 2498 24730563 ~ 24730780 (+)
G1156453 NA non-coding downstream 5856 24733921 ~ 24734132 (+)
G1157104 NA non-coding downstream 19479 24747544 ~ 24747781 (+)
G1157121 NA non-coding downstream 39507 24767572 ~ 24767798 (+)
G1157124 NA non-coding downstream 43631 24771696 ~ 24771900 (+)
G1156247 NA other upstream 398900 24326783 ~ 24328963 (+)
G1156089 NA other upstream 723895 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 1128860 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 1156083 23511706 ~ 23591433 (+)
G1155006 LOC100136012 other upstream 1768512 22958932 ~ 22959351 (+)
G1157117 NA other downstream 36037 24764102 ~ 24764346 (+)
G1157292 NA other downstream 373475 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 685044 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 734862 25462927 ~ 25463458 (+)
G1157972 NA other downstream 745057 25473122 ~ 25473978 (+)

Expression


Co-expression Network