G1157104


Basic Information

Item Value
gene id G1157104
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 24747544 ~ 24747781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1319573
gtgatggaggaccccgttttgagtgatggcagcacacatagttagttatattacccccacgctgttcagggacattggtaattgtcctctgtcctattacatttcttcagcggcgcctggttttggtaaggttgaagccaacctcatccacataaataaattcatggcgaattacatgggcatccagctccaatactctctgtaacagacaaaaggatatacagatgagtaaatatgg

Function

NR:

description
PREDICTED: uncharacterized protein LOC107663208

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1319573 True 238 lncRNA 0.44 1 24747544 24747781

Neighbor

gene id symbol gene type direction distance location
LOC110486034 LOC106586144 coding upstream 29007 24707147 ~ 24719985 (+)
LOC110486033 LOC106564832 coding upstream 123356 24554945 ~ 24624188 (+)
LOC110486030 LOC106586106 coding upstream 225041 24484604 ~ 24522503 (+)
esf1 LOC106564836 coding upstream 271457 24464332 ~ 24476087 (+)
LOC110486025 LOC106586048 coding upstream 306260 24413520 ~ 24441284 (+)
LOC110486038 LOC106586164 coding downstream 156270 24904051 ~ 24996436 (+)
LOC110486039 LOC106586175 coding downstream 300060 25047841 ~ 25065592 (+)
iip iip coding downstream 323771 25071552 ~ 25072676 (+)
LOC110486040 ifm3 coding downstream 342784 25090565 ~ 25091740 (+)
LOC118938245 NA coding downstream 345764 25093545 ~ 25104730 (+)
G1156453 NA non-coding upstream 13412 24733921 ~ 24734132 (+)
G1156448 NA non-coding upstream 16764 24730563 ~ 24730780 (+)
G1156446 NA non-coding upstream 19479 24727863 ~ 24728065 (+)
G1156443 NA non-coding upstream 33863 24713364 ~ 24713681 (+)
G1157121 NA non-coding downstream 19791 24767572 ~ 24767798 (+)
G1157124 NA non-coding downstream 23915 24771696 ~ 24771900 (+)
G1157126 NA non-coding downstream 29331 24777112 ~ 24777348 (+)
G1157134 NA non-coding downstream 40307 24788088 ~ 24788315 (+)
G1157138 NA non-coding downstream 45333 24793114 ~ 24793324 (+)
G1156247 NA other upstream 418581 24326783 ~ 24328963 (+)
G1156089 NA other upstream 743576 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 1148541 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 1175764 23511706 ~ 23591433 (+)
G1155006 LOC100136012 other upstream 1788193 22958932 ~ 22959351 (+)
G1157117 NA other downstream 16321 24764102 ~ 24764346 (+)
G1157292 NA other downstream 353759 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 665328 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 715146 25462927 ~ 25463458 (+)
G1157972 NA other downstream 725341 25473122 ~ 25473978 (+)

Expression


Co-expression Network