G1157126


Basic Information

Item Value
gene id G1157126
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 24777112 ~ 24777348 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1319595
GCACAGGAATAGCAGAGTACAACATCCACCAACCTTAAGAATATGTTGCCGTTTTCTTGGCTTTAAATTGAGACATTGTGttattacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccagaggcctgtaatttttgctaataaattcataaaaaatcctacaatgtgatttttgggattttttttcctcattttgtctgtcatagttgaagtgtaccta

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1319595 True 237 lncRNA 0.36 1 24777112 24777348

Neighbor

gene id symbol gene type direction distance location
LOC110486034 LOC106586144 coding upstream 58575 24707147 ~ 24719985 (+)
LOC110486033 LOC106564832 coding upstream 152924 24554945 ~ 24624188 (+)
LOC110486030 LOC106586106 coding upstream 254609 24484604 ~ 24522503 (+)
esf1 LOC106564836 coding upstream 301025 24464332 ~ 24476087 (+)
LOC110486025 LOC106586048 coding upstream 335828 24413520 ~ 24441284 (+)
LOC110486038 LOC106586164 coding downstream 126703 24904051 ~ 24996436 (+)
LOC110486039 LOC106586175 coding downstream 270493 25047841 ~ 25065592 (+)
iip iip coding downstream 294204 25071552 ~ 25072676 (+)
LOC110486040 ifm3 coding downstream 313217 25090565 ~ 25091740 (+)
LOC118938245 NA coding downstream 316197 25093545 ~ 25104730 (+)
G1157124 NA non-coding upstream 5212 24771696 ~ 24771900 (+)
G1157121 NA non-coding upstream 9314 24767572 ~ 24767798 (+)
G1157104 NA non-coding upstream 29331 24747544 ~ 24747781 (+)
G1156453 NA non-coding upstream 42980 24733921 ~ 24734132 (+)
G1156448 NA non-coding upstream 46332 24730563 ~ 24730780 (+)
G1157134 NA non-coding downstream 10740 24788088 ~ 24788315 (+)
G1157138 NA non-coding downstream 15766 24793114 ~ 24793324 (+)
G1157144 NA non-coding downstream 21336 24798684 ~ 24798923 (+)
G1157158 NA non-coding downstream 38371 24815719 ~ 24815971 (+)
G1157163 NA non-coding downstream 48200 24825548 ~ 24825814 (+)
G1157117 NA other upstream 12766 24764102 ~ 24764346 (+)
G1156247 NA other upstream 448149 24326783 ~ 24328963 (+)
G1156089 NA other upstream 773144 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 1178109 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 1205332 23511706 ~ 23591433 (+)
G1157292 NA other downstream 324192 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 635761 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 685579 25462927 ~ 25463458 (+)
G1157972 NA other downstream 695774 25473122 ~ 25473978 (+)
LOC110516920 LOC106578598 other downstream 1079284 25813029 ~ 25872772 (+)

Expression


Co-expression Network