G1157144


Basic Information

Item Value
gene id G1157144
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 24798684 ~ 24798923 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1319613
aacttttttaacaaatcaaaaacggaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccatcttttgctgcgattacagctgtaagttgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcaattttcagttctttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1319613 True 240 lncRNA 0.40 1 24798684 24798923

Neighbor

gene id symbol gene type direction distance location
LOC110486034 LOC106586144 coding upstream 80147 24707147 ~ 24719985 (+)
LOC110486033 LOC106564832 coding upstream 174496 24554945 ~ 24624188 (+)
LOC110486030 LOC106586106 coding upstream 276181 24484604 ~ 24522503 (+)
esf1 LOC106564836 coding upstream 322597 24464332 ~ 24476087 (+)
LOC110486025 LOC106586048 coding upstream 357400 24413520 ~ 24441284 (+)
LOC110486038 LOC106586164 coding downstream 105128 24904051 ~ 24996436 (+)
LOC110486039 LOC106586175 coding downstream 248918 25047841 ~ 25065592 (+)
iip iip coding downstream 272629 25071552 ~ 25072676 (+)
LOC110486040 ifm3 coding downstream 291642 25090565 ~ 25091740 (+)
LOC118938245 NA coding downstream 294622 25093545 ~ 25104730 (+)
G1157138 NA non-coding upstream 5360 24793114 ~ 24793324 (+)
G1157134 NA non-coding upstream 10369 24788088 ~ 24788315 (+)
G1157126 NA non-coding upstream 21336 24777112 ~ 24777348 (+)
G1157124 NA non-coding upstream 26784 24771696 ~ 24771900 (+)
G1157121 NA non-coding upstream 30886 24767572 ~ 24767798 (+)
G1157158 NA non-coding downstream 16796 24815719 ~ 24815971 (+)
G1157163 NA non-coding downstream 26625 24825548 ~ 24825814 (+)
G1157165 NA non-coding downstream 28237 24827160 ~ 24827395 (+)
G1157170 NA non-coding downstream 33407 24832330 ~ 24832834 (+)
G1157171 NA non-coding downstream 34482 24833405 ~ 24833663 (+)
G1157117 NA other upstream 34338 24764102 ~ 24764346 (+)
G1156247 NA other upstream 469721 24326783 ~ 24328963 (+)
G1156089 NA other upstream 794716 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 1199681 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 1226904 23511706 ~ 23591433 (+)
G1157292 NA other downstream 302617 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 614186 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 664004 25462927 ~ 25463458 (+)
G1157972 NA other downstream 674199 25473122 ~ 25473978 (+)
LOC110516920 LOC106578598 other downstream 1057709 25813029 ~ 25872772 (+)

Expression


Co-expression Network