G1157158


Basic Information

Item Value
gene id G1157158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 24815719 ~ 24815971 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1319628
ggggggggtactgtcaggttctgaccttagttattttgttatgtctttgttttagtatggtcagggcgtgagttgggtgggtagtctatgttcttttttctatgttgtggttttgtgtttggactggtatggttctcaatcagagttaGGTgttgttcgttgtctctgattgagaatcatacttaggtagccttttcccacctgtttttGGTGGGTGagtattttctgttctgtgttttgcttcactgttcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1319628 True 253 lncRNA 0.42 1 24815719 24815971

Neighbor

gene id symbol gene type direction distance location
LOC110486034 LOC106586144 coding upstream 97182 24707147 ~ 24719985 (+)
LOC110486033 LOC106564832 coding upstream 191531 24554945 ~ 24624188 (+)
LOC110486030 LOC106586106 coding upstream 293216 24484604 ~ 24522503 (+)
esf1 LOC106564836 coding upstream 339632 24464332 ~ 24476087 (+)
LOC110486025 LOC106586048 coding upstream 374435 24413520 ~ 24441284 (+)
LOC110486038 LOC106586164 coding downstream 88080 24904051 ~ 24996436 (+)
LOC110486039 LOC106586175 coding downstream 231870 25047841 ~ 25065592 (+)
iip iip coding downstream 255581 25071552 ~ 25072676 (+)
LOC110486040 ifm3 coding downstream 274594 25090565 ~ 25091740 (+)
LOC118938245 NA coding downstream 277574 25093545 ~ 25104730 (+)
G1157144 NA non-coding upstream 16796 24798684 ~ 24798923 (+)
G1157138 NA non-coding upstream 22395 24793114 ~ 24793324 (+)
G1157134 NA non-coding upstream 27404 24788088 ~ 24788315 (+)
G1157126 NA non-coding upstream 38371 24777112 ~ 24777348 (+)
G1157124 NA non-coding upstream 43819 24771696 ~ 24771900 (+)
G1157163 NA non-coding downstream 9577 24825548 ~ 24825814 (+)
G1157165 NA non-coding downstream 11189 24827160 ~ 24827395 (+)
G1157170 NA non-coding downstream 16359 24832330 ~ 24832834 (+)
G1157171 NA non-coding downstream 17434 24833405 ~ 24833663 (+)
G1157172 NA non-coding downstream 17986 24833957 ~ 24834328 (+)
G1157117 NA other upstream 51373 24764102 ~ 24764346 (+)
G1156247 NA other upstream 486756 24326783 ~ 24328963 (+)
G1156089 NA other upstream 811751 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 1216716 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 1243939 23511706 ~ 23591433 (+)
G1157292 NA other downstream 285569 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 597138 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 646956 25462927 ~ 25463458 (+)
G1157972 NA other downstream 657151 25473122 ~ 25473978 (+)
LOC110516920 LOC106578598 other downstream 1040661 25813029 ~ 25872772 (+)

Expression


Co-expression Network