Gene
RNA
| Item | Value |
|---|---|
| gene id | G1157165 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 24827160 ~ 24827395 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1319635 | True | 236 | lncRNA | 0.38 | 1 | 24827160 | 24827395 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486034 | LOC106586144 | coding | upstream | 108623 | 24707147 ~ 24719985 (+) |
| LOC110486033 | LOC106564832 | coding | upstream | 202972 | 24554945 ~ 24624188 (+) |
| LOC110486030 | LOC106586106 | coding | upstream | 304657 | 24484604 ~ 24522503 (+) |
| esf1 | LOC106564836 | coding | upstream | 351073 | 24464332 ~ 24476087 (+) |
| LOC110486025 | LOC106586048 | coding | upstream | 385876 | 24413520 ~ 24441284 (+) |
| LOC110486038 | LOC106586164 | coding | downstream | 76656 | 24904051 ~ 24996436 (+) |
| LOC110486039 | LOC106586175 | coding | downstream | 220446 | 25047841 ~ 25065592 (+) |
| iip | iip | coding | downstream | 244157 | 25071552 ~ 25072676 (+) |
| LOC110486040 | ifm3 | coding | downstream | 263170 | 25090565 ~ 25091740 (+) |
| LOC118938245 | NA | coding | downstream | 266150 | 25093545 ~ 25104730 (+) |
| G1157163 | NA | non-coding | upstream | 1346 | 24825548 ~ 24825814 (+) |
| G1157158 | NA | non-coding | upstream | 11189 | 24815719 ~ 24815971 (+) |
| G1157144 | NA | non-coding | upstream | 28237 | 24798684 ~ 24798923 (+) |
| G1157138 | NA | non-coding | upstream | 33836 | 24793114 ~ 24793324 (+) |
| G1157134 | NA | non-coding | upstream | 38845 | 24788088 ~ 24788315 (+) |
| G1157170 | NA | non-coding | downstream | 4935 | 24832330 ~ 24832834 (+) |
| G1157171 | NA | non-coding | downstream | 6010 | 24833405 ~ 24833663 (+) |
| G1157172 | NA | non-coding | downstream | 6562 | 24833957 ~ 24834328 (+) |
| G1157266 | NA | non-coding | downstream | 169864 | 24997259 ~ 24997471 (+) |
| G1157282 | NA | non-coding | downstream | 193971 | 25021366 ~ 25021662 (+) |
| G1157117 | NA | other | upstream | 62814 | 24764102 ~ 24764346 (+) |
| G1156247 | NA | other | upstream | 498197 | 24326783 ~ 24328963 (+) |
| G1156089 | NA | other | upstream | 823192 | 23998646 ~ 24003968 (+) |
| LOC110485992 | LOC106585723 | other | upstream | 1228157 | 23595876 ~ 23608606 (+) |
| pitpnc1a | LOC106585713 | other | upstream | 1255380 | 23511706 ~ 23591433 (+) |
| G1157292 | NA | other | downstream | 274145 | 25082584 ~ 25105138 (+) |
| LOC110486053 | polr3f | other | downstream | 585714 | 25410869 ~ 25419361 (+) |
| G1157952 | LOC106584892 | other | downstream | 635532 | 25462927 ~ 25463458 (+) |
| G1157972 | NA | other | downstream | 645727 | 25473122 ~ 25473978 (+) |
| LOC110516920 | LOC106578598 | other | downstream | 1029237 | 25813029 ~ 25872772 (+) |
