G1157284


Basic Information

Item Value
gene id G1157284
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 25023473 ~ 25023834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1319765
cgataatatatcaaccgcaaatgtctttcacagtaggagaggggaaaacaatggctgtccaaattctgttgcgcaagcaaaactcatgtgaccacttgacgcaatgttatcgttctggctcatttttcaaaataaaagcctgaaactatgtctgaagactgttgacaccttgaggaagcgataggaaaaggaatctggttcatatccctttaaatggagcaaagggatgctatggaacatggagttttcaaaatagaagacACCTCCTgctttgatttttctcagggttccgcctgcaatatcagttctgttatactcacagacaatattttttggaaacttgagtgttttctatccaatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1319765 True 362 lncRNA 0.40 1 25023473 25023834

Neighbor

gene id symbol gene type direction distance location
LOC110486038 LOC106586164 coding upstream 27037 24904051 ~ 24996436 (+)
LOC110486034 LOC106586144 coding upstream 304936 24707147 ~ 24719985 (+)
LOC110486033 LOC106564832 coding upstream 399285 24554945 ~ 24624188 (+)
LOC110486030 LOC106586106 coding upstream 500970 24484604 ~ 24522503 (+)
esf1 LOC106564836 coding upstream 547386 24464332 ~ 24476087 (+)
LOC110486039 LOC106586175 coding downstream 24007 25047841 ~ 25065592 (+)
iip iip coding downstream 47718 25071552 ~ 25072676 (+)
LOC110486040 ifm3 coding downstream 66731 25090565 ~ 25091740 (+)
LOC118938245 NA coding downstream 69711 25093545 ~ 25104730 (+)
ifm3 ifm3 coding downstream 77690 25101524 ~ 25102652 (+)
G1157282 NA non-coding upstream 1811 25021366 ~ 25021662 (+)
G1157266 NA non-coding upstream 26002 24997259 ~ 24997471 (+)
G1157172 NA non-coding upstream 189145 24833957 ~ 24834328 (+)
G1157171 NA non-coding upstream 189810 24833405 ~ 24833663 (+)
G1157170 NA non-coding upstream 190639 24832330 ~ 24832834 (+)
G1157286 NA non-coding downstream 2428 25026262 ~ 25026465 (+)
G1157309 NA non-coding downstream 46808 25070642 ~ 25071023 (+)
G1157292 NA non-coding downstream 58750 25082584 ~ 25105138 (+)
G1157617 NA non-coding downstream 168524 25192358 ~ 25192584 (+)
G1157643 NA non-coding downstream 172511 25196345 ~ 25196646 (+)
G1157117 NA other upstream 259127 24764102 ~ 24764346 (+)
G1156247 NA other upstream 694510 24326783 ~ 24328963 (+)
G1156089 NA other upstream 1019505 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 1424470 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 1451693 23511706 ~ 23591433 (+)
LOC110486053 polr3f other downstream 389275 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 439093 25462927 ~ 25463458 (+)
G1157972 NA other downstream 449288 25473122 ~ 25473978 (+)
LOC110516920 LOC106578598 other downstream 832798 25813029 ~ 25872772 (+)

Expression


Co-expression Network