G1157617


Basic Information

Item Value
gene id G1157617
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 25192358 ~ 25192584 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1320160
aaaatATACTTTCCTGAATAGCAAGCACCCCCAGGGTGTGAAGAAAATCAAAGTTGTGACAATGCACTTCAGTTGGCCTCAATAAATGGACTATCATGCACAAATGTCTTTTGTTTAAACAAACAATGACCAAATTTAAAGCCACAAGTACATACAATCTCAAATCTTCATAAACAAGAGATGTGGACTAactgaaatgcttatttacgggcccttcccaacaatgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1320160 True 227 lncRNA 0.37 1 25192358 25192584

Neighbor

gene id symbol gene type direction distance location
LOC110486045 s5a2 coding upstream 3974 25168165 ~ 25188384 (+)
LOC110486044 LOC106586224 coding upstream 48395 25141199 ~ 25143963 (+)
LOC118938245 NA coding upstream 87628 25093545 ~ 25104730 (+)
ifm3 ifm3 coding upstream 89706 25101524 ~ 25102652 (+)
LOC110486040 ifm3 coding upstream 100618 25090565 ~ 25091740 (+)
LOC110486047 tmem63b coding downstream 27952 25220536 ~ 25319211 (+)
LOC110486051 LOC106584925 coding downstream 170245 25362829 ~ 25376936 (+)
LOC118938060 NA coding downstream 197912 25390496 ~ 25392938 (+)
LOC110486052 LOC106584902 coding downstream 203547 25396131 ~ 25404252 (+)
LOC110486053 polr3f coding downstream 218285 25410869 ~ 25419361 (+)
G1157292 NA non-coding upstream 105948 25082584 ~ 25105138 (+)
G1157309 NA non-coding upstream 121335 25070642 ~ 25071023 (+)
G1157286 NA non-coding upstream 165893 25026262 ~ 25026465 (+)
G1157284 NA non-coding upstream 168524 25023473 ~ 25023834 (+)
G1157282 NA non-coding upstream 170696 25021366 ~ 25021662 (+)
G1157643 NA non-coding downstream 3761 25196345 ~ 25196646 (+)
G1157653 NA non-coding downstream 13879 25206463 ~ 25206703 (+)
G1157667 NA non-coding downstream 129643 25322227 ~ 25322831 (+)
G1157746 NA non-coding downstream 162723 25355307 ~ 25355533 (+)
G1157117 NA other upstream 428012 24764102 ~ 24764346 (+)
G1156247 NA other upstream 863395 24326783 ~ 24328963 (+)
G1156089 NA other upstream 1188390 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 1593355 23595876 ~ 23608606 (+)
G1157952 LOC106584892 other downstream 270343 25462927 ~ 25463458 (+)
G1157972 NA other downstream 280538 25473122 ~ 25473978 (+)
LOC110516920 LOC106578598 other downstream 664048 25813029 ~ 25872772 (+)
G1158563 NA other downstream 917912 26110496 ~ 26115864 (+)

Expression


Co-expression Network