G1157746


Basic Information

Item Value
gene id G1157746
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 25355307 ~ 25355533 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1320314
AGACAACCAATAATATCATACCTGTGCTAAAGTCTCAAGACCAATTAATTGAAGACAACAAAACAAAAGCTATATTATTTAGAAACCACCTACAAAATGTTAATTCTCGTCCCAATTAATCCCTCTATAACAAAGAATGGAAAAACATTGTCAACAGAGAaatatagaaaacagtatatacttCAAATCTGACACCAGTAGAccatccccccaccctctctgttACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1320314 True 227 lncRNA 0.34 1 25355307 25355533

Neighbor

gene id symbol gene type direction distance location
LOC110486047 tmem63b coding upstream 36096 25220536 ~ 25319211 (+)
LOC110486045 s5a2 coding upstream 166923 25168165 ~ 25188384 (+)
LOC110486044 LOC106586224 coding upstream 211344 25141199 ~ 25143963 (+)
LOC118938245 NA coding upstream 250577 25093545 ~ 25104730 (+)
LOC110486051 LOC106584925 coding downstream 7296 25362829 ~ 25376936 (+)
LOC118938060 NA coding downstream 34963 25390496 ~ 25392938 (+)
LOC110486052 LOC106584902 coding downstream 40598 25396131 ~ 25404252 (+)
LOC110486053 polr3f coding downstream 55336 25410869 ~ 25419361 (+)
LOC110486054 LOC106564778 coding downstream 85582 25441115 ~ 25455367 (+)
G1157667 NA non-coding upstream 32476 25322227 ~ 25322831 (+)
G1157653 NA non-coding upstream 148604 25206463 ~ 25206703 (+)
G1157643 NA non-coding upstream 158661 25196345 ~ 25196646 (+)
G1157617 NA non-coding upstream 162723 25192358 ~ 25192584 (+)
G1157751 NA non-coding downstream 8375 25363908 ~ 25364184 (+)
G1157755 NA non-coding downstream 17131 25372664 ~ 25372916 (+)
G1157744 NA non-coding downstream 21596 25377129 ~ 25377837 (+)
G1157758 NA non-coding downstream 24240 25379773 ~ 25380095 (+)
G1157292 NA other upstream 250169 25082584 ~ 25105138 (+)
G1157117 NA other upstream 590961 24764102 ~ 24764346 (+)
G1156247 NA other upstream 1026344 24326783 ~ 24328963 (+)
G1156089 NA other upstream 1351339 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 1756304 23595876 ~ 23608606 (+)
G1157952 LOC106584892 other downstream 107394 25462927 ~ 25463458 (+)
G1157972 NA other downstream 117589 25473122 ~ 25473978 (+)
LOC110516920 LOC106578598 other downstream 501099 25813029 ~ 25872772 (+)
G1158563 NA other downstream 754963 26110496 ~ 26115864 (+)

Expression


Co-expression Network