G1157772


Basic Information

Item Value
gene id G1157772
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 25405994 ~ 25406197 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1320343
gtgcataaatgtattttgtccccccacaccaaacgcgatcactacacacaggttaaaataccaaaacaaacactgaaccaattacattaatttggggacaggttgaaaagcattaaacctttatggcaatttagctagctagctagctaatttgtcctatttagctagcttgctgttgctagctaatttgtcctgggatataaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1320343 True 204 lncRNA 0.38 1 25405994 25406197

Neighbor

gene id symbol gene type direction distance location
LOC110486052 LOC106584902 coding upstream 1742 25396131 ~ 25404252 (+)
LOC118938060 NA coding upstream 13056 25390496 ~ 25392938 (+)
LOC110486051 LOC106584925 coding upstream 29893 25362829 ~ 25376936 (+)
LOC110486047 tmem63b coding upstream 86783 25220536 ~ 25319211 (+)
LOC110486045 s5a2 coding upstream 217610 25168165 ~ 25188384 (+)
LOC110486053 polr3f coding downstream 4672 25410869 ~ 25419361 (+)
LOC110486054 LOC106564778 coding downstream 34918 25441115 ~ 25455367 (+)
LOC110486056 LOC106584953 coding downstream 93603 25499800 ~ 25607402 (+)
LOC118938061 NA coding downstream 405681 25784839 ~ 25866420 (+)
LOC110516919 NA coding downstream 439086 25845283 ~ 25849666 (+)
G1157761 NA non-coding upstream 19627 25385588 ~ 25386367 (+)
G1157759 NA non-coding upstream 21628 25384051 ~ 25384366 (+)
G1157758 NA non-coding upstream 25899 25379773 ~ 25380095 (+)
G1157744 NA non-coding upstream 28157 25377129 ~ 25377837 (+)
G1157779 NA non-coding downstream 10288 25416485 ~ 25417210 (+)
G1157784 NA non-coding downstream 17001 25423198 ~ 25423683 (+)
G1157785 NA non-coding downstream 18792 25424989 ~ 25425323 (+)
G1157788 NA non-coding downstream 23334 25429531 ~ 25429979 (+)
G1157783 NA non-coding downstream 25618 25431815 ~ 25432257 (+)
G1157292 NA other upstream 300856 25082584 ~ 25105138 (+)
G1157117 NA other upstream 641648 24764102 ~ 24764346 (+)
G1156247 NA other upstream 1077031 24326783 ~ 24328963 (+)
G1156089 NA other upstream 1402026 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 1806991 23595876 ~ 23608606 (+)
G1157952 LOC106584892 other downstream 56730 25462927 ~ 25463458 (+)
G1157972 NA other downstream 66925 25473122 ~ 25473978 (+)
LOC110516920 LOC106578598 other downstream 450435 25813029 ~ 25872772 (+)
G1158563 NA other downstream 704299 26110496 ~ 26115864 (+)

Expression


Co-expression Network