G1157953


Basic Information

Item Value
gene id G1157953
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 25463461 ~ 25463682 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1320534
AAAAACAACCCTGtgtatcaaaaatacattgaaGCTGCTTCATTGTCTAATCGGGCATTTATGGAAAAgctaaaaataaaaatggaaagcAGAATAATCTATATCTCTGACCACATTCTCTGTGGGTCTGTGATCATTTCTAGGAAGGATGGAAGTCGGGTAGGGAGGAACATAGCAAGGGAGCATCTTTTAAGTATACTGTATGAACGTTCAAAAAAATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1320534 True 222 lncRNA 0.37 1 25463461 25463682

Neighbor

gene id symbol gene type direction distance location
LOC110486054 LOC106564778 coding upstream 8094 25441115 ~ 25455367 (+)
LOC110486053 polr3f coding upstream 44100 25410869 ~ 25419361 (+)
LOC110486052 LOC106584902 coding upstream 59209 25396131 ~ 25404252 (+)
LOC118938060 NA coding upstream 70523 25390496 ~ 25392938 (+)
LOC110486051 LOC106584925 coding upstream 87360 25362829 ~ 25376936 (+)
LOC110486056 LOC106584953 coding downstream 36118 25499800 ~ 25607402 (+)
LOC118938061 NA coding downstream 348196 25784839 ~ 25866420 (+)
LOC110516919 NA coding downstream 381601 25845283 ~ 25849666 (+)
LOC110516920 LOC106578598 coding downstream 392654 25813029 ~ 25872772 (+)
LOC110487413 NA coding downstream 502925 25966607 ~ 25970529 (+)
G1157951 LOC106584892 non-coding upstream 785 25462169 ~ 25462676 (+)
G1157941 NA non-coding upstream 24903 25438355 ~ 25438558 (+)
G1157940 NA non-coding upstream 25165 25438052 ~ 25438296 (+)
G1157783 NA non-coding upstream 31204 25431815 ~ 25432257 (+)
G1157788 NA non-coding upstream 33482 25429531 ~ 25429979 (+)
G1158071 NA non-coding downstream 169507 25633189 ~ 25649000 (+)
G1158114 NA non-coding downstream 240317 25703999 ~ 25704303 (+)
G1158302 NA non-coding downstream 266254 25729936 ~ 25730186 (+)
G1158304 NA non-coding downstream 266813 25730495 ~ 25730790 (+)
G1158310 NA non-coding downstream 270355 25734037 ~ 25734303 (+)
G1157952 LOC106584892 other upstream 3 25462927 ~ 25463458 (+)
G1157292 NA other upstream 358323 25082584 ~ 25105138 (+)
G1157117 NA other upstream 699115 24764102 ~ 24764346 (+)
G1156247 NA other upstream 1134498 24326783 ~ 24328963 (+)
G1157972 NA other downstream 9440 25473122 ~ 25473978 (+)
G1158563 NA other downstream 646814 26110496 ~ 26115864 (+)
G1158612 LOC106586052 other downstream 700117 26163799 ~ 26217394 (+)
LOC110487383 LOC106564416 other downstream 1645443 26977083 ~ 27174368 (+)

Expression


Co-expression Network