G1158302


Basic Information

Item Value
gene id G1158302
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 25729936 ~ 25730186 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1320925
tcctctgacactgcctggtatagagcttgaagaatattgaaaagaataatgggcaaatgttgcacaatccaggtgtggaaagctcttagagacttacccagaaagactcacagctgtaatctctgccaaatgtgcttgtacaaagtattgactcgagGGTGTGATGTAAATTAgatatatagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1320925 True 251 lncRNA 0.41 1 25729936 25730186

Neighbor

gene id symbol gene type direction distance location
LOC110486056 LOC106584953 coding upstream 122534 25499800 ~ 25607402 (+)
LOC110486054 LOC106564778 coding upstream 274569 25441115 ~ 25455367 (+)
LOC110486053 polr3f coding upstream 310575 25410869 ~ 25419361 (+)
LOC110486052 LOC106584902 coding upstream 325684 25396131 ~ 25404252 (+)
LOC118938060 NA coding upstream 336998 25390496 ~ 25392938 (+)
LOC118938061 NA coding downstream 81692 25784839 ~ 25866420 (+)
LOC110516919 NA coding downstream 115097 25845283 ~ 25849666 (+)
LOC110516920 LOC106578598 coding downstream 126150 25813029 ~ 25872772 (+)
LOC110487413 NA coding downstream 236421 25966607 ~ 25970529 (+)
LOC118938446 LOC106595012 coding downstream 314796 26044982 ~ 26048058 (+)
G1158114 NA non-coding upstream 25633 25703999 ~ 25704303 (+)
G1158071 NA non-coding upstream 80936 25633189 ~ 25649000 (+)
G1157953 NA non-coding upstream 266254 25463461 ~ 25463682 (+)
G1157951 LOC106584892 non-coding upstream 267260 25462169 ~ 25462676 (+)
G1157941 NA non-coding upstream 291378 25438355 ~ 25438558 (+)
G1158304 NA non-coding downstream 309 25730495 ~ 25730790 (+)
G1158310 NA non-coding downstream 3851 25734037 ~ 25734303 (+)
G1157972 NA other upstream 255958 25473122 ~ 25473978 (+)
G1157952 LOC106584892 other upstream 266478 25462927 ~ 25463458 (+)
G1157292 NA other upstream 624798 25082584 ~ 25105138 (+)
G1157117 NA other upstream 965590 24764102 ~ 24764346 (+)
G1158563 NA other downstream 380310 26110496 ~ 26115864 (+)
G1158612 LOC106586052 other downstream 433613 26163799 ~ 26217394 (+)
LOC110487383 LOC106564416 other downstream 1378939 26977083 ~ 27174368 (+)
LOC110485126 NA other downstream 1560051 27285432 ~ 27291404 (+)

Expression


Co-expression Network