G1158304


Basic Information

Item Value
gene id G1158304
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 25730495 ~ 25730790 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1320927
TTCTACATTTTCAAATGTCCAAATATTACATTTGCTGAGCTGAGCCAGACTGGAATGGAATCAGAGTATTGCAGGCAaatcacccgtgatacaagtcagtattcaacgtccATCCATGGCTGAGGATGTCAGGATATGAAGTGGAAACCGGACATTAGGGCTGTTACCTTTAAGTAAGTTTAGGTTTTTCTAGGACATTGTGAATGTGgataagcatctgcctctgattccaaaggtttcATGGTTGACTCCTGCGATAGAAAGTCATTTAGGAtaattttgttttaagcctatcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1320927 True 296 lncRNA 0.40 1 25730495 25730790

Neighbor

gene id symbol gene type direction distance location
LOC110486056 LOC106584953 coding upstream 123093 25499800 ~ 25607402 (+)
LOC110486054 LOC106564778 coding upstream 275128 25441115 ~ 25455367 (+)
LOC110486053 polr3f coding upstream 311134 25410869 ~ 25419361 (+)
LOC110486052 LOC106584902 coding upstream 326243 25396131 ~ 25404252 (+)
LOC118938060 NA coding upstream 337557 25390496 ~ 25392938 (+)
LOC118938061 NA coding downstream 81088 25784839 ~ 25866420 (+)
LOC110516919 NA coding downstream 114493 25845283 ~ 25849666 (+)
LOC110516920 LOC106578598 coding downstream 125546 25813029 ~ 25872772 (+)
LOC110487413 NA coding downstream 235817 25966607 ~ 25970529 (+)
LOC118938446 LOC106595012 coding downstream 314192 26044982 ~ 26048058 (+)
G1158302 NA non-coding upstream 309 25729936 ~ 25730186 (+)
G1158114 NA non-coding upstream 26192 25703999 ~ 25704303 (+)
G1158071 NA non-coding upstream 81495 25633189 ~ 25649000 (+)
G1157953 NA non-coding upstream 266813 25463461 ~ 25463682 (+)
G1157951 LOC106584892 non-coding upstream 267819 25462169 ~ 25462676 (+)
G1158310 NA non-coding downstream 3247 25734037 ~ 25734303 (+)
G1158424 NA non-coding downstream 116042 25846832 ~ 25847671 (+)
G1157972 NA other upstream 256517 25473122 ~ 25473978 (+)
G1157952 LOC106584892 other upstream 267037 25462927 ~ 25463458 (+)
G1157292 NA other upstream 625357 25082584 ~ 25105138 (+)
G1157117 NA other upstream 966149 24764102 ~ 24764346 (+)
G1158563 NA other downstream 379706 26110496 ~ 26115864 (+)
G1158612 LOC106586052 other downstream 433009 26163799 ~ 26217394 (+)
LOC110487383 LOC106564416 other downstream 1378335 26977083 ~ 27174368 (+)
LOC110485126 NA other downstream 1559447 27285432 ~ 27291404 (+)

Expression


Co-expression Network