G1158310


Basic Information

Item Value
gene id G1158310
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 25734037 ~ 25734303 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1320933
ggtcttagggctcaggtcctccgagagagagagagagaaagagagaaagagaaagagagaattagagagagcatacttaaattcacacaggacaccggataagacaggagaaatactccagatatgacagactgaccctagcccccgacacataaacaactgcagcataaatactggaggctatgACAGGagaggtcgggagacactgtggccccatcccgacgatacccccggacagggcaaaacaggcaggatataaccctaccc

Function

NR:

description
ZK1236.4, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1320933 True 267 lncRNA 0.51 1 25734037 25734303

Neighbor

gene id symbol gene type direction distance location
LOC110486056 LOC106584953 coding upstream 126635 25499800 ~ 25607402 (+)
LOC110486054 LOC106564778 coding upstream 278670 25441115 ~ 25455367 (+)
LOC110486053 polr3f coding upstream 314676 25410869 ~ 25419361 (+)
LOC110486052 LOC106584902 coding upstream 329785 25396131 ~ 25404252 (+)
LOC118938060 NA coding upstream 341099 25390496 ~ 25392938 (+)
LOC118938061 NA coding downstream 77575 25784839 ~ 25866420 (+)
LOC110516919 NA coding downstream 110980 25845283 ~ 25849666 (+)
LOC110516920 LOC106578598 coding downstream 122033 25813029 ~ 25872772 (+)
LOC110487413 NA coding downstream 232304 25966607 ~ 25970529 (+)
LOC118938446 LOC106595012 coding downstream 310679 26044982 ~ 26048058 (+)
G1158304 NA non-coding upstream 3247 25730495 ~ 25730790 (+)
G1158302 NA non-coding upstream 3851 25729936 ~ 25730186 (+)
G1158114 NA non-coding upstream 29734 25703999 ~ 25704303 (+)
G1158071 NA non-coding upstream 85037 25633189 ~ 25649000 (+)
G1157953 NA non-coding upstream 270355 25463461 ~ 25463682 (+)
G1158424 NA non-coding downstream 112529 25846832 ~ 25847671 (+)
G1158422 NA non-coding downstream 114341 25848644 ~ 25970954 (+)
G1157972 NA other upstream 260059 25473122 ~ 25473978 (+)
G1157952 LOC106584892 other upstream 270579 25462927 ~ 25463458 (+)
G1157292 NA other upstream 628899 25082584 ~ 25105138 (+)
G1157117 NA other upstream 969691 24764102 ~ 24764346 (+)
G1158563 NA other downstream 376193 26110496 ~ 26115864 (+)
G1158612 LOC106586052 other downstream 429496 26163799 ~ 26217394 (+)
LOC110487383 LOC106564416 other downstream 1374822 26977083 ~ 27174368 (+)
LOC110485126 NA other downstream 1555934 27285432 ~ 27291404 (+)

Expression


Co-expression Network