G1158650


Basic Information

Item Value
gene id G1158650
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 26237066 ~ 26237505 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1321370
GAGGAATTCCCTGTTAAGCGGAGACAGCTTCCACCCTACACCCCTAAAAAACAATTGTAACCAGATCATGGATGCAACTCAGTTACTAAGTCTTTAACCACACTGTGTTGTTACACtggtgagtaaaaactcatgcTTCCTACCCTTTAACTTTTTGactgaaaataaaatatacattttactcaACTACGTCCAGTCAGCAGATGGACTTTAGGCCGCCCGTTGTGACTCCGTCAAGAATTCAGCAGagcaagtttgtatgaaggtctggttaTAAAATGGGTTCATAGTTCAATAGTAATATCCTGTAACACCCTCTGGTGATGAACTTTGCTGCCCTGTTTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1321370 True 348 lncRNA 0.41 2 26237066 26237505

Neighbor

gene id symbol gene type direction distance location
LOC110487402 NA coding upstream 81836 26141541 ~ 26155230 (+)
LOC110487386 LOC106595012 coding upstream 141390 26087931 ~ 26095676 (+)
LOC110487373 LOC106608452 coding upstream 156148 26058164 ~ 26080918 (+)
LOC110487393 NA coding upstream 170732 26058706 ~ 26066334 (+)
LOC118938446 LOC106595012 coding upstream 189008 26044982 ~ 26048058 (+)
LOC118938455 NA coding downstream 16321 26253826 ~ 26255885 (+)
LOC110487414 samd3 coding downstream 65897 26303402 ~ 26314343 (+)
LOC110487384 NA coding downstream 136315 26373820 ~ 26379952 (+)
LOC110485120 NA coding downstream 194808 26432313 ~ 26449529 (+)
LOC118938436 NA coding downstream 227000 26464505 ~ 26472221 (+)
G1158640 NA non-coding upstream 9741 26221082 ~ 26227325 (+)
G1158562 NA non-coding upstream 97928 26128783 ~ 26139138 (+)
G1158539 NA non-coding upstream 151937 26072261 ~ 26085129 (+)
G1158376 NA non-coding downstream 20320 26257825 ~ 26671072 (+)
G1158349 NA non-coding downstream 27471 26264976 ~ 26807861 (+)
G1158411 NA non-coding downstream 78942 26316447 ~ 26542441 (+)
G1158714 NA non-coding downstream 150308 26387813 ~ 26389650 (+)
G1158723 NA non-coding downstream 165069 26402574 ~ 26480917 (+)
G1158612 LOC106586052 other upstream 19672 26163799 ~ 26217394 (+)
G1158563 NA other upstream 121202 26110496 ~ 26115864 (+)
LOC110516920 LOC106578598 other upstream 365663 25813029 ~ 25872772 (+)
G1157972 NA other upstream 763088 25473122 ~ 25473978 (+)
G1157952 LOC106584892 other upstream 773608 25462927 ~ 25463458 (+)
LOC110487383 LOC106564416 other downstream 871620 26977083 ~ 27174368 (+)
LOC110485126 NA other downstream 1052732 27285432 ~ 27291404 (+)
G1158342 NA other downstream 1255649 27493154 ~ 27768641 (+)
LOC110485129 LOC106591690 other downstream 1538614 27768154 ~ 27788573 (+)
G1159435 NA other downstream 1542717 27780222 ~ 27786165 (+)

Expression


Co-expression Network