G1158388


Basic Information

Item Value
gene id G1158388
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 26988858 ~ 26989600 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1321091
cctggatttttcCGTGAGGCTAATATCCCTATCATGTTGAAATCAGTAGAACAGGGGGCAAATGATTACGGatattctacattgtgacattaattcattgatatcatgaaacaactccttcatgtatgtattttctgatgtttgttCAGAGGTATTTTATCAGATAATCTCTGGTGTAGCCTCACAGCTATTAGATTTCTCTCCtatgtgtgttttctctggtgtGACATCAGGCTGGTCAACTGagtaaatctcttcccacattgagcacagctataagatttctctcctgtgtgtgttctctggtatACAGTTAGATAGCTAGactagtaaaactcttcccacattgagcacatctataaggtttctctcctgtgtttgTACTCTGGTGTATAGTCAGACTGCTAGATGTAACAAAACTCTTGACATTttcatcacagctataagatttctctcctgtgtggattgtctgatgaattttaatgcctgatgaggaggtgaatctcttcccacaaACAGAGCAGCGGTGAGTTCtcttccctgtgggtctctgctggtgtttctagAGGTGTTCTGatgtggagagactcttctctgccttgtCAGCATCATGATGTTGTTGAAGCTCCCCAGAGGATCTACAATAGTCACGTCTCTCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1321091 True 659 lncRNA 0.41 2 26988858 26989600

Neighbor

gene id symbol gene type direction distance location
LOC110485124 NA coding upstream 9625 26975950 ~ 26979233 (+)
LOC118938064 NA coding upstream 116603 26848690 ~ 26872255 (+)
LOC118938063 NA coding upstream 171323 26813566 ~ 26817535 (+)
LOC110487360 NA coding upstream 236151 26704020 ~ 26753678 (+)
LOC110487400 NA coding upstream 298264 26675239 ~ 26690594 (+)
trnak-uuu-6 NA coding downstream 57827 27047427 ~ 27047499 (+)
LOC110487383 LOC106564416 coding downstream 119278 26977083 ~ 27174368 (+)
LOC118938484 NA coding downstream 153896 27143496 ~ 27146545 (+)
LOC110487391 NA coding downstream 256076 27245676 ~ 27257780 (+)
LOC110485126 NA coding downstream 295832 27285432 ~ 27291404 (+)
G1159041 NA non-coding upstream 14545 26973986 ~ 26974313 (+)
G1159030 NA non-coding upstream 38972 26942754 ~ 26949886 (+)
G1158998 NA non-coding upstream 70090 26898413 ~ 26918768 (+)
G1158400 NA non-coding upstream 91688 26798887 ~ 26897170 (+)
G1158946 NA non-coding upstream 198900 26789143 ~ 26789958 (+)
G1159049 NA non-coding downstream 3458 26993058 ~ 26996400 (+)
G1159065 NA non-coding downstream 36141 27025741 ~ 27030842 (+)
LOC118938440 NA non-coding downstream 268975 27258575 ~ 27630770 (+)
G1159181 NA non-coding downstream 273539 27263139 ~ 27264833 (+)
G1159206 NA non-coding downstream 304983 27294583 ~ 27295249 (+)
G1158612 LOC106586052 other upstream 771464 26163799 ~ 26217394 (+)
G1158563 NA other upstream 872994 26110496 ~ 26115864 (+)
LOC110516920 LOC106578598 other upstream 1117455 25813029 ~ 25872772 (+)
G1157972 NA other upstream 1514880 25473122 ~ 25473978 (+)
G1157952 LOC106584892 other upstream 1525400 25462927 ~ 25463458 (+)
G1158342 NA other downstream 503554 27493154 ~ 27768641 (+)
LOC110485129 LOC106591690 other downstream 786519 27768154 ~ 27788573 (+)
G1159435 NA other downstream 790622 27780222 ~ 27786165 (+)

Expression


Co-expression Network