G1159049


Basic Information

Item Value
gene id G1159049
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 26993058 ~ 26996400 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1321802
ggtgtgggatatcatctataataatgacataaaggcaatgctgctacggtgtgggatattgtctataataatgacataaaggatATGCTGCTAagtgctacggtgtgggatgtcatctataatatgacataaaggcaatgctgctacggtgtgggatgtcatctataataatgagataaaggctatgctgctacagtgtgggatgtcatctataataatgacataaaggctctGCTGCTACagtgtgggatgtcatctatactaatgacataaaggctatgctgctacgtgctacggtgtgggatgtcatctataatatgACAAAGGCAATGCTGCTACGTActacggtgtgggatgtcatctataatatgACAAAGGCAATGCTGCTACGTGCTACagtgtgggatgtcatctataataatgacataaaggctatgctgttacgtgctacggtgtgggatgtcatctataataatgacataaaggctatgctgctacggtgtgggatgtcgtctataataatgacataaaggctatgctgctacttGCTACGGTGTGGGaggtcatctataataatgacataaaggctatgctgctacggtgtgggatgtcgtctataataatgacataaaggctatgctgctac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1321802 True 646 lncRNA 0.41 4 26993058 26996400

Neighbor

gene id symbol gene type direction distance location
LOC110485124 NA coding upstream 13825 26975950 ~ 26979233 (+)
LOC118938064 NA coding upstream 120803 26848690 ~ 26872255 (+)
LOC118938063 NA coding upstream 175523 26813566 ~ 26817535 (+)
LOC110487360 NA coding upstream 240351 26704020 ~ 26753678 (+)
LOC110487400 NA coding upstream 302464 26675239 ~ 26690594 (+)
trnak-uuu-6 NA coding downstream 51027 27047427 ~ 27047499 (+)
LOC110487383 LOC106564416 coding downstream 112478 26977083 ~ 27174368 (+)
LOC118938484 NA coding downstream 147096 27143496 ~ 27146545 (+)
LOC110487391 NA coding downstream 249276 27245676 ~ 27257780 (+)
LOC110485126 NA coding downstream 289032 27285432 ~ 27291404 (+)
G1158388 NA non-coding upstream 3458 26988858 ~ 26989600 (+)
G1159041 NA non-coding upstream 18745 26973986 ~ 26974313 (+)
G1159030 NA non-coding upstream 43172 26942754 ~ 26949886 (+)
G1158998 NA non-coding upstream 74290 26898413 ~ 26918768 (+)
G1158400 NA non-coding upstream 95888 26798887 ~ 26897170 (+)
G1159065 NA non-coding downstream 29341 27025741 ~ 27030842 (+)
LOC118938440 NA non-coding downstream 262175 27258575 ~ 27630770 (+)
G1159181 NA non-coding downstream 266739 27263139 ~ 27264833 (+)
G1159206 NA non-coding downstream 298183 27294583 ~ 27295249 (+)
G1159229 NA non-coding downstream 341215 27337615 ~ 27338168 (+)
G1158612 LOC106586052 other upstream 775664 26163799 ~ 26217394 (+)
G1158563 NA other upstream 877194 26110496 ~ 26115864 (+)
LOC110516920 LOC106578598 other upstream 1121655 25813029 ~ 25872772 (+)
G1157972 NA other upstream 1519080 25473122 ~ 25473978 (+)
G1157952 LOC106584892 other upstream 1529600 25462927 ~ 25463458 (+)
G1158342 NA other downstream 496754 27493154 ~ 27768641 (+)
LOC110485129 LOC106591690 other downstream 779719 27768154 ~ 27788573 (+)
G1159435 NA other downstream 783822 27780222 ~ 27786165 (+)

Expression


Co-expression Network